Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0430
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.3  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 232 TKQQDELQXYAYQLWMQGSKDIVR 303
           TK+Q+ L   A + W++  K IVR
Sbjct: 92  TKKQEMLVRSAIKYWVERHKHIVR 115


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 36   KPFKLFCVFSWRLYMPTEPQSP 101
            +P  +F   +   YMP+EP++P
Sbjct: 946  EPLYVFVRSAPNFYMPSEPKAP 967


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 102 TPNSKTIFTTASSLPITTMP 161
           TP +  I  + +++PIT++P
Sbjct: 841 TPTTSVISMSGTTVPITSLP 860


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,710
Number of Sequences: 438
Number of extensions: 2262
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)