Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0428
(546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 150 8e-37
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-36
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 145 2e-35
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 65 4e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 64 7e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 9e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 63 2e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 61 7e-10
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 57 1e-08
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 46 2e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 37 0.009
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 35 0.038
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.15
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 33 0.20
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 32 0.27
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.35
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 150 bits (363), Expect = 8e-37
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEA+ GKYV
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRP 300
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
++FRP NFVFG SGAGNNWA HY GA V S V+R
Sbjct: 296 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 334
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP N + P
Sbjct: 350 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 384
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 149 bits (362), Expect = 1e-36
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA+LVDL PGTM +V S P+G P
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRP 87
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
++FRP NFVFG SGAGNNWA HY GA V S V+R
Sbjct: 83 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP N + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 149 bits (362), Expect = 1e-36
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA+LVDL PGTM +V S P+G P
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRP 87
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 145 bits (352), Expect = 2e-35
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIV +QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PR+VL+DL PGTM +V S P+G P
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRP 87
Score = 55.6 bits (128), Expect = 2e-08
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
++FRP NFVFG SGAGNNWA HY GA + S V+R
Sbjct: 83 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVR 121
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP N + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVP 171
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 64.9 bits (151), Expect = 4e-11
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 181
MRE + + GQ G QIG+ WE+ EHG+ G + + D N +++E +GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPY 250
+VPRAV VDL P + V + Y
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTY 83
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE + + GQ G QIG+ WE+ EHG+ G + + D N +++E +GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 185 VPRAVLVDLXPGTMXAVTSXPY 250
VPRAV VDL P + V + Y
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTY 516
Score = 33.9 bits (74), Expect = 0.087
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P V G A NN+A HY G V IR
Sbjct: 82 TYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIR 123
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G V IR
Sbjct: 515 TYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIR 556
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 64.1 bits (149), Expect = 7e-11
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 VXMREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASS 175
+ RE + V GQ G QIG+ WE+ EHG+ G + + D N +++E +
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 176 GKYVPRAVLVDLXPGTMXAVTSXPY 250
GK+VPRAV VDL P + V + Y
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTY 147
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 181
+RE + + GQ G QIG+ WE+ EHG+ G + + D N +++E +GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 182 YVPRAVLVDLXPGTMXAVTSXPY 250
+VPRAV VDL P + V + Y
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTY 668
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE + + GQ G QIG+ WE+ EHG+ G + + D N +++E +GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 185 VPRAVLVDLXP 217
VPRAV VDL P
Sbjct: 574 VPRAVFVDLEP 584
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G V IR
Sbjct: 146 TYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 187
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 667 TYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 708
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 63.7 bits (148), Expect = 9e-11
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQ--LDRINVYYNEASSGK 181
MRE + V GQ G QIG+ WE+ EHG+ G + + D N +++E GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 182 YVPRAVLVDLXPGTM 226
+VPRAV VDL P +
Sbjct: 61 HVPRAVFVDLEPSVV 75
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 63.7 bits (148), Expect = 9e-11
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 181
MRE + + GQ G Q+G+ WE+ EHG+ G + + D N +++E +GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPY 250
+VPRAV VDL P + V + Y
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTY 83
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXG 333
T R+LF P + G A NN+A HY G
Sbjct: 82 TYRQLFHPEQLITGKEDAANNYARGHYTIG 111
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 181
MRE + V GQ G Q+G+ WE+ EHG+ G + + D N +++E SGK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPY 250
+VPRAV DL P + V + Y
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTY 83
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + + +R
Sbjct: 82 TYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLR 123
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE + + GQ G QIG+ WE+ EHG+ G + + D N +++E +GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 185 VPRAVLVDLXPGTMXAVTSXPY 250
VPRAV VDL P + V + Y
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTY 82
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 81 TYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIR 122
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE V + GQ G Q+G+ WE+ EHG+ G + + D N +++E +GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 185 VPRAVLVDLXPGTMXAVTSXPY 250
VPRAV VDL P + + + Y
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTY 501
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 53 IGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKYVPRAVLVDLXPGTM 226
+G+ WE+ EHG+ G + + D N +++E +GK+VPRAV DL P +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 227 XAVTSXPY 250
V + Y
Sbjct: 61 DEVRTGTY 68
Score = 34.3 bits (75), Expect = 0.066
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + + IR
Sbjct: 500 TYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIR 541
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXG 333
T R+LF P + G A NN+A HY G
Sbjct: 67 TYRQLFHPEQLITGKEDAANNYARGHYTVG 96
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HS GGGTG L L +Y A YP
Sbjct: 557 HSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYP 591
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE + + GQ G QIG+ WE+ EHG+ G + + D N ++ E +GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 185 VPRAVLVDLXPGTMXAVTSXPY 250
VPRAV VDL P + V + Y
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTY 454
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE + V GQ G Q+G+ WE+ EHG+ G + + D N +++E +GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 185 VPRAVLVDLXPGTMXAVTSXPY 250
VPRAV DL P + V + Y
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTY 887
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 886 TYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIR 927
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXG 333
T R+LF P + G A NN+A HY G
Sbjct: 453 TYRQLFHPEQLITGKEDAANNYARGHYTVG 482
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 181
MRE + + GQ G QIG+ WE+ EHG+ G + D N +++E +GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 182 YVPRAVLVDLXP 217
+VPRAV VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
++FRP NFVFG SGAGNNWA HY GA V S V+R
Sbjct: 28 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +2
Query: 176 GKYVPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
GKYVPRAVLVDL PGTM +V S P+G P
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRP 32
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG TL + EYP N + P
Sbjct: 82 HSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVP 116
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +1
Query: 247 LRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
L +FRP NFV SGA NNWA HY GA + + V+R
Sbjct: 37 LGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLR 77
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 170 SSGKYVPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
+ G+YVPR++LVDL PGTM AV P G+ P
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRP 43
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 420 SLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
+LGGGTG GTL LS EYP + + P
Sbjct: 94 ALGGGTGSGLGTLILSKIREEYPDRILSAFSVVP 127
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGE--SDLQLDRINVYYNEASSGK 181
MRE + + GQ G QIG+ WE+ EHG+ G + +D D + +++E +SGK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 182 Y 184
+
Sbjct: 256 H 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 65 FWEIISDEHGVDTTGVYKG-ESDLQLDRINVYYNE 166
FWE+I++EHG+D G +S +Q DR+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 140 DRINVYYNEASSGKYVPRAVLVDLXPGTMXAVTSXPYGSCSGPITLSS 283
D N ++ E +GK+VPRAV VDL P + + + Y P L S
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLS 59
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 47 TYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIR 88
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 161 NEASSGKYVPRAVLVDLXPGTMXAVTSXPY 250
+EA++GKYVPRAVLVDL P + V + Y
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMY 994
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 250 RKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
R L+ P + G A NN+A HY G V IR
Sbjct: 995 RYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIR 1034
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL L + EYP + ++ +P
Sbjct: 18 HSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFP 52
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 35.1 bits (77), Expect = 0.038
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG G+L LS EYP + P
Sbjct: 45 HSLGGGTGSGLGSLLLSKIREEYPDRLVSSFCVLP 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 19 TYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 60
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 7 TYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 48
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 7 TYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIR 48
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R LF P + G A NN+A HY G + IR
Sbjct: 7 TYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIR 48
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R+LF P + G A NN+A HY G + IR
Sbjct: 7 TYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIR 48
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.35
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 17 IVHVQAGQCGNQIGSKFWEIISDE 88
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -3
Query: 199 NGTGDIFTTRCLIIVNVYSVELQVA 125
NGT D +TT+C++I ++ S+ Q+A
Sbjct: 2282 NGTCDPYTTKCVLIDSLRSISYQLA 2306
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 27.9 bits (59), Expect = 5.7
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 65 FWEIISDEHGVDTTGVYKGESDLQLDRI 148
FW+I +++G T YK S+L ++++
Sbjct: 290 FWQISFEKYGTQITTYYKNPSNLMIEQV 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,262,592
Number of Sequences: 59808
Number of extensions: 196876
Number of successful extensions: 536
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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