Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0428
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    38   2e-04
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    38   2e-04
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    38   2e-04
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    38   2e-04
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    28   0.17 
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    26   0.93 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   5.0  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   6.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
           HSLGGGTG   GTL +S    EYP    N  +  P
Sbjct: 33  HSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP 67


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
           HSLGGGTG   GTL +S    EYP    N  +  P
Sbjct: 33  HSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP 67


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
           HSLGGGTG   GTL +S    EYP    N  +  P
Sbjct: 33  HSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP 67


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
           HSLGGGTG   GTL +S    EYP    N  +  P
Sbjct: 33  HSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP 67


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
          gambiae putativetubulin alpha chain mRNA, complete cds.
          ).
          Length = 91

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 8  MREIVHVQAGQCGNQIGSKFWE 73
          MRE + V  GQ G QIG+  W+
Sbjct: 1  MRECISVHVGQAGVQIGNPCWD 22


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 104 TGVYKGESDLQLDRINVYYNEASSGK 181
           TGVY     + +DR+N  Y E    K
Sbjct: 203 TGVYSDREGVSIDRLNAQYGEGHCEK 228


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 62  KFWEIISDEHGVDTTG 109
           KFW  + D  G+++TG
Sbjct: 225 KFWPTVCDYFGIESTG 240


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
          protein protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 56 GSKFWEIISDEHGV 97
          GS+FW   S+ HG+
Sbjct: 17 GSRFWRACSNNHGM 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,276
Number of Sequences: 2352
Number of extensions: 6709
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)