Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0428
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 150 7e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 149 2e-36
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 149 2e-36
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 149 2e-36
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 147 4e-36
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 113 8e-26
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 113 8e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 68 4e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 68 4e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 68 4e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 68 4e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 68 5e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 68 5e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 67 7e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 67 9e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 67 9e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 66 2e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 66 2e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 66 2e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 2e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 44 7e-05
Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical pr... 30 0.95
AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear recep... 30 0.95
AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear recep... 30 0.95
AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical... 30 0.95
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 1.7
Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF003151-21|AAK18914.2| 259|Caenorhabditis elegans Hypothetical... 27 8.8
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 151 bits (365), Expect = 4e-37
Identities = 67/87 (77%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVHVQAGQCGNQIG+KFWE+ISDEHG+ G YKGESDLQL+RINVYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP NFVFG SGAGNNWA HY GA V + V+R
Sbjct: 83 QLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP + + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 150 bits (363), Expect = 7e-37
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH+QAGQCGNQIG+KFWE+ISDEHG+D TG Y G+SDLQL+RINVYYNEAS GKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA LVDL PGTM +V + P+G P
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRP 87
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP NFVFG SGAGNNWA HY GA V + V+R
Sbjct: 83 QLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Score = 35.5 bits (78), Expect = 0.025
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYP 488
HSLGGGTG GTL +S EYP
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYP 160
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 66/87 (75%), Positives = 75/87 (86%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGESDLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP NFVFG SGAGNNWA HY GA V + VIR
Sbjct: 83 QLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S E+P + + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVP 171
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 149 bits (360), Expect = 2e-36
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP N+VFG SGAGNNWA HY GA V + V+R
Sbjct: 83 QLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP N + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 149 bits (360), Expect = 2e-36
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVH+QAGQCGNQIGSKFWE+ISDEHG+D +G Y G+SDLQL+RINVYYNEA S KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP N+VFG SGAGNNWA HY GA V + V+R
Sbjct: 83 QLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP N + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 147 bits (357), Expect = 4e-36
Identities = 65/87 (74%), Positives = 75/87 (86%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MREIVHVQAGQCGNQIGSKFWE+ISDEHG+ G +KGE+DLQL+RI+VYYNEA++GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRAVLVDL PGTM +V S P+G P
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+LFRP NFVFG SGAGNNWA HY GA V + VIR
Sbjct: 83 QLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
HSLGGGTG GTL +S EYP + + P
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (272), Expect = 8e-26
Identities = 50/87 (57%), Positives = 62/87 (71%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA+LVDL P ++ V S YG P
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDP 87
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
KLF P N V G SGAGNNW+ +Y GA V SVIR
Sbjct: 83 KLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIR 121
Score = 31.1 bits (67), Expect = 0.54
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEY 485
HSLGGGTG G+L +S EY
Sbjct: 137 HSLGGGTGSGLGSLLISKLREEY 159
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 113 bits (272), Expect = 8e-26
Identities = 50/87 (57%), Positives = 62/87 (71%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
M+EI++VQ GQCGNQIG+KFWE IS+EHG+ T G YKG++ QL+RI YY E KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA+LVDL P ++ V S YG P
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDP 87
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +1
Query: 253 KLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
KLF P N V G SGAGNNW+ +Y GA V SVIR
Sbjct: 83 KLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIR 121
Score = 31.1 bits (67), Expect = 0.54
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 417 HSLGGGTGXXXGTLXLSNXXXEY 485
HSLGGGTG G+L +S EY
Sbjct: 137 HSLGGGTGSGLGSLLISKLREEY 159
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYK-GESDLQLDRINVYYNEASSGKYV 187
RE V + GQ G QIG+ WE+ EHG+D G K E + + + +++E+ +GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 188 PRAVLVDLXPGTMXAVTSXPYGSCSGP 268
PRA+ VDL P + + + YG+ P
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHP 92
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 256 LFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
LF P + G A NN+A HY G + IR
Sbjct: 89 LFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIR 126
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 68.9 bits (161), Expect = 2e-12
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD--RINVYYNEASSGK 181
MREIV + GQ G QIG+ WE+ EHG+ G+ ++ ++ N +++E SGK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPYGSCSGPITLSS 283
+VPRA+ VDL P + V + Y P L S
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLIS 94
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T KLF P + G A NN+A HY G + +R
Sbjct: 82 TYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVR 123
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 181
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
+VPRAV+VDL P + + + Y S P
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R LF P + G A NN+A HY G + IR
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGKY 184
RE++ + GQ G Q+G+ WE+ EHG+ G+ E L + D N +++E +GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 185 VPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
VPRA++VDL P + + + Y + P
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHP 94
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T + LF P + G A NN+A HY G + +R
Sbjct: 87 TYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVR 128
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 181
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
+VPRAV+VDL P + + + Y S P
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R LF P + G A NN+A HY G + IR
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGK 181
MRE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 182 YVPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
+VPRAV+VDL P + + + Y S P
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R LF P + G A NN+A HY G + IR
Sbjct: 82 TYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 123
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 67.7 bits (158), Expect = 5e-12
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T +KLF P + G A NN+A HY G + + IR
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 67.7 bits (158), Expect = 5e-12
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G +S + + ++++ SG+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T +KLF P + G A NN+A HY G + + IR
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 67.3 bits (157), Expect = 7e-12
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGES--DLQLDRINVYYNEASSGKY 184
RE++ + GQ G QIG+ WE+ EHG+ G + + D + + IN ++ E + GK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 185 VPRAVLVDLXPGTMXAVTSXPYGSCSGPITLSS 283
VPR + VDL P + V + Y S P L S
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 100
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 363 DQVKRXALXFXS-NXXXXXHSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
D+VKR A HS GGGTG +L + EY A YP
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 179
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2
Query: 17 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 196
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 197 VLVDLXPGTMXAVTSXP 247
VLVDL P + + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2
Query: 17 IVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVPRA 196
++ V GQCGNQ+ FW+ + DEHG++ G E D+ D+ ++ + +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMN-DKKDLLFYQADDDHYVPRA 65
Query: 197 VLVDLXPGTMXAVTSXP 247
VLVDL P + + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.1 bits (154), Expect = 2e-11
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T +KLF P + G A NN+A HY G + + IR
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 11 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDL--QLDRINVYYNEASSGKY 184
RE++ + GQ G QIG+ WE+ EHG+ G + L D + +++E SG++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 185 VPRAVLVDLXPGTMXAVTSXPYGSCSGP 268
VPRAV+VDL P + + + Y S P
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHP 88
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T R LF P + G A NN+A HY G + IR
Sbjct: 81 TYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIR 122
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 2e-11
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G + + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 244 TLRKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
T +KLF P + G A NN+A HY G + + IR
Sbjct: 80 TYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 65.7 bits (153), Expect = 2e-11
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNY 81
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 250 RKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+KLF P + G A NN+A HY G + + IR
Sbjct: 82 KKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 65.7 bits (153), Expect = 2e-11
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G E + ++++ +G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNY 81
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 250 RKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+KLF P + G A NN+A HY G + + IR
Sbjct: 82 KKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +2
Query: 8 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 187
MRE++ + GQ G QIG+ WE+ EHG+ G E D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 188 PRAVLVDLXPGTMXAVTSXPY 250
PR++ VDL P + + + Y
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAY 80
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 250 RKLFRPXNFVFGXSGAGNNWAXXHYXXGAXXVSSXTSVIR 369
+KLF P + G A NN+A HY G + + IR
Sbjct: 81 KKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIR 120
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 86 EHGVDTTGVYKGES--DLQLDRINVYYNEASSGKYVPRAVLVDLXPGTMXAVTSXPYGSC 259
EHG+ G + + D + + IN ++ E + GK+VPR + VDL P + V + Y S
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 260 SGPITLSS 283
P L S
Sbjct: 65 FHPEQLLS 72
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +3
Query: 363 DQVKRXALXFXS-NXXXXXHSLGGGTGXXXGTLXLSNXXXEYPXXXXNXLAXYP 521
D+VKR A HS GGGTG +L + EY A YP
Sbjct: 98 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 151
>Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 202 ENGTGDIFTTRCLIIVNVYSVELQVALPFVNS 107
E TG I+T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical
protein W05B5.3b protein.
Length = 336
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 202 ENGTGDIFTTRCLIIVNVYSVELQVALPFVNS 107
E TG I+T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 336
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 202 ENGTGDIFTTRCLIIVNVYSVELQVALPFVNS 107
E TG I+T RC I N + L+ A+ F NS
Sbjct: 61 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 92
>AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 514
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 202 ENGTGDIFTTRCLIIVNVYSVELQVALPFVNS 107
E TG I+T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 202 ENGTGDIFTTRCLIIVNVYSVELQVALPFVNS 107
E TG I+T RC I N + L+ A+ F NS
Sbjct: 239 EKCTGPIYTDRCPITSNFIVIPLKAAIDFANS 270
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 194 HGGHIYH*MPHYSKRLFCRAAGRSPLCKLRSCRRHARLRL 75
HGGH+ H + +C AG C+ +H + RL
Sbjct: 5024 HGGHVNHIATWFETEKYCPVAGCDCRCQRSKQTKHLKARL 5063
>Z35597-4|CAA84647.2| 548|Caenorhabditis elegans Hypothetical
protein C36E8.4 protein.
Length = 548
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 43 RESDRIEVLGDNLRRAWRRHDRSLQ 117
R +IE LG NLR+ + RH +L+
Sbjct: 262 RYKRKIETLGPNLRQMFERHSNNLE 286
>AF003151-21|AAK18914.2| 259|Caenorhabditis elegans Hypothetical
protein D1007.8 protein.
Length = 259
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 29 QAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLD 142
Q+ C N +G EI G+ T+G+ K ESD+ D
Sbjct: 170 QSSSCENNMGVWPTEIEQLAAGISTSGLVKEESDVSED 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,761,335
Number of Sequences: 27780
Number of extensions: 143202
Number of successful extensions: 391
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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