Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0427
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.14 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -2

Query: 684  TNFPTVRSSLSEN-EKIPLPRGSLP-TLVSWVWKACGIHETTYNSIMKC 544
            T+  T  SS++ N   IP   G+ P  ++++ W AC     T +SIMKC
Sbjct: 1009 THSATSNSSVNANTNNIPTNAGTTPGAILAFSW-ACNDAVMTSDSIMKC 1056



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 351 LPSNRCGSRNRSTTSLAPPLYTG 283
           LP++RC SR  S + + P   +G
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSG 101


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +2

Query: 596 TQETRVGREPLGNGIFSFSDSDDLTVGKFVRLSPKELLDATGGPFPASKVKXRRKHS 766
           T E +V ++  G+G      S++LT  K   +   E  + +GG + ++K   R  HS
Sbjct: 15  TDEVKVFKDE-GDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHS 70


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 371 STDPYGVLPLWRSNDLN 421
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 686  RLSPKELLDATGGPFPASKVKXRRKHSFSFDCSR 787
            +L+ K  L   GGP P S        ++  DC+R
Sbjct: 1260 QLAQKYQLPKMGGPQPYSACSENAFAAYPGDCTR 1293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,335
Number of Sequences: 336
Number of extensions: 4490
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)