Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0427
(865 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 4e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 185 4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 185 5e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 163 2e-40
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 54 2e-07
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 54 2e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_54| Best HMM Match : Actin (HMM E-Value=0) 37 0.024
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (453), Expect = 2e-47
Identities = 99/143 (69%), Positives = 110/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + L P FLGMES H + + ++R+
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQ-PSFLGMESSGIHETTYNSIMKCDVDIRKD---- 266
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L V+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 267 LYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 326
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 327 QQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 185 bits (451), Expect = 4e-47
Identities = 99/143 (69%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + + P FLGMES H + + ++R+
Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKD---- 255
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L VLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 256 LYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 315
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGP+IVHRKCF
Sbjct: 316 QQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 185 bits (451), Expect = 4e-47
Identities = 99/143 (69%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + + P FLGMES H + + ++R+
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKD---- 293
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 185 bits (451), Expect = 4e-47
Identities = 99/143 (69%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + + P FLGMES H + + ++R+
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKD---- 292
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 185 bits (450), Expect = 5e-47
Identities = 99/143 (69%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + + P FLGMES H + + ++R+
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKD---- 293
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L VLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (446), Expect = 1e-46
Identities = 98/143 (68%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
KSYELPDGQVITIG + + + P FLGMES H + + ++R+
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQ-PSFLGMESAGIHETTYNSIMKCDVDIRKD---- 292
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
L VLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 163 bits (395), Expect = 2e-40
Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 3/142 (2%)
Frame = -1
Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLRHPRDHI*LHHEVRRGHP*---GL 521
K+YELPDGQVI+IG + + + P FLGME+ P H +++ + + L
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQ-PAFLGMEA---PGIHEAIYNCIMKCDVDIRKDL 67
Query: 520 VRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 341
VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQ
Sbjct: 68 YSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQ 127
Query: 340 QMWISKQEYDESGPSIVHRKCF 275
QMWI+K+EY E GP IVHRKCF
Sbjct: 128 QMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 54.0 bits (124), Expect = 2e-07
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Frame = -1
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPERK 392
L + VLSGG+TM+ R+Q++I + P ++ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 391 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 263
Y+VW GGS+LAS F + +K +YDE GPSI F HR
Sbjct: 302 YAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = -1
Query: 526 GLVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 356
GL +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 355 L 353
L
Sbjct: 230 L 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -1
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITA-LAPSTMKIKIIAPPERKYSVWIGGSILAS-LS 350
L + VL G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 324 LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMK 383
Query: 349 TFQQMWISKQEYDESG 302
W++++EY+E G
Sbjct: 384 DKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = -1
Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 371
L VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 370 SILASLSTFQQMWISKQEYDE 308
+I SL +++ Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 36.7 bits (81), Expect = 0.024
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 582 GIHETTYNSIMKCDVDIRKDLYAN 511
GIHE+ + SI KCD+D+R +L+ N
Sbjct: 2318 GIHESIFKSIKKCDIDLRAELFHN 2341
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.5 bits (68), Expect = 0.92
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 456 FCIRSAIPGYMVVPPDNTCWRTSP 527
FC PG + +P D TCW+ P
Sbjct: 32 FCCTVERPGLLTIPDDYTCWKVGP 55
>SB_23357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -2
Query: 789 FREQSKEKLCXRRFLTFEAGNGPPVASSSSFGESLTNFPTVRSSLSENEKIP 634
+R +K L F + NG P+ ++ +++N P S++S +IP
Sbjct: 2 WRRNTKIALLLLAFNLLSSSNGKPLTNTQDVATNVSNKPAKPSNVSHTPRIP 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,688,906
Number of Sequences: 59808
Number of extensions: 603177
Number of successful extensions: 1864
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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