Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0427
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         190   6e-50
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         190   6e-50
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         190   6e-50
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          182   2e-47
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     26   1.7  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  190 bits (462), Expect = 6e-50
 Identities = 102/143 (71%), Positives = 110/143 (76%), Gaps = 4/143 (2%)
 Frame = -1

Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
           KSYELPDGQVITIG  +    + L   P FLGME+   H   +  +     ++R+     
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKD---- 293

Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
           L    VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353

Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
           QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  190 bits (462), Expect = 6e-50
 Identities = 102/143 (71%), Positives = 110/143 (76%), Gaps = 4/143 (2%)
 Frame = -1

Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
           KSYELPDGQVITIG  +    + L   P FLGME+   H   +  +     ++R+     
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKD---- 293

Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
           L    VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353

Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
           QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  190 bits (462), Expect = 6e-50
 Identities = 102/143 (71%), Positives = 110/143 (76%), Gaps = 4/143 (2%)
 Frame = -1

Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLR-HPRDHI*LHH---EVRRGHP*G 524
           KSYELPDGQVITIG  +    + L   P FLGME+   H   +  +     ++R+     
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKD---- 293

Query: 523 LVRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 344
           L    VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 294 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353

Query: 343 QQMWISKQEYDESGPSIVHRKCF 275
           QQMWISKQEYDESGPSIVHRKCF
Sbjct: 354 QQMWISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  182 bits (442), Expect = 2e-47
 Identities = 97/142 (68%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = -1

Query: 691 KSYELPDGQVITIGKRKDSVAQRLSSNPRFLGMESLRHPRDHI*LHHEVRRGHP*---GL 521
           KSYELPDGQVITIG  +    + L   P FLGMES      H  +++ + R        L
Sbjct: 239 KSYELPDGQVITIGNERFRAPEALFQ-PSFLGMESTGI---HETVYNSIMRCDVDIRKDL 294

Query: 520 VRQHVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 341
               VLSGGTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 354

Query: 340 QMWISKQEYDESGPSIVHRKCF 275
            MWISK EYDE GP IVHRKCF
Sbjct: 355 TMWISKHEYDEGGPGIVHRKCF 376


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -3

Query: 599 GYGKLAASTRPHITPS*SATWTSVRTCTPTRIVRWYHHVP--WNRRPYAK 456
           G    ++ T P+   S S   + V +CTP+  + W  +V     R+PY+K
Sbjct: 230 GLRSYSSETYPNPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKPYSK 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 891,485
Number of Sequences: 2352
Number of extensions: 19372
Number of successful extensions: 62
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)