Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0425
         (805 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ...    29   4.8  
At5g66450.1 68418.m08380 phosphatidic acid phosphatase-related /...    28   8.3  
At2g40820.1 68415.m05038 proline-rich family protein contains pr...    28   8.3  

>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 941

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/79 (22%), Positives = 39/79 (49%)
 Frame = +2

Query: 107 NFLSTFTFYSDYHFITMDDEVVLLPAKSGEYIARYAKHVQIHEEGLDKALKRYSRQCLQV 286
           N +S++  Y +     +++   LL  K  E +A      ++ E+ +   +  Y+   +++
Sbjct: 194 NCISSYN-YGEKVMKNLEEVKELLSKKHFEVVAHKIPVPKVEEKNIHTTVGLYAM--VEM 250

Query: 287 NWKSLMQEQVYILMLNTQG 343
            WKSLM +++  L L+  G
Sbjct: 251 AWKSLMNDEIRTLCLHGMG 269


>At5g66450.1 68418.m08380 phosphatidic acid phosphatase-related /
           PAP2-related contains Pfam profile PF01569: PAP2
           superfamily
          Length = 286

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
 Frame = +1

Query: 256 KEILTSMSTSKLE---IPDAGTGIHPNVEHPRAVDWVFVADTLNFCFWSYSGARKWTVGG 426
           +E   S S+S+L+   + DAG GI       R   W+  A   +     + GA  W V G
Sbjct: 81  QEAFISNSSSELQNELVSDAGDGIEAIAN--RLSKWIVAALFGSVLLLRHDGAALWAVIG 138

Query: 427 HSGYYALEAALDRAIKE 477
                 L  AL R + +
Sbjct: 139 SVSNSVLSVALKRILNQ 155


>At2g40820.1 68415.m05038 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 903

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 691 ISSSFKADLLASFKQVVKVPLYFSSKIAPVSCS--TDILSL 575
           ++  F  +L A+ K V +VPLYFSS    VS +   D+ SL
Sbjct: 80  LACKFDKNLAAASKLVDEVPLYFSSSYDYVSVAKLNDVTSL 120


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,237,871
Number of Sequences: 28952
Number of extensions: 354195
Number of successful extensions: 902
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)