Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0423
(359 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.29
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 27 1.2
SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr ... 25 3.5
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 25 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 6.2
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 24 6.2
SPBC2G5.07c |rpc25||DNA-directed RNA polymerase III complex subu... 24 8.2
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 24 8.2
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 0.29
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 1500 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTP 1559
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ + P SS
Sbjct: 1560 ITSSTVVNTSTPITSSS 1576
Score = 28.3 bits (60), Expect = 0.38
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 1368 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1427
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 1428 ITSSTVVNSSTPITSST 1444
Score = 28.3 bits (60), Expect = 0.38
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 2208 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 2267
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2268 ITSSTVVNSSTPITSST 2284
Score = 27.9 bits (59), Expect = 0.50
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 1416 ITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 1475
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 1476 ITSSTVVNSSTPITSST 1492
Score = 27.9 bits (59), Expect = 0.50
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 2388 ITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTP 2447
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P SS
Sbjct: 2448 ITSSTVVNSSTPITSSS 2464
Score = 27.9 bits (59), Expect = 0.50
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S T+ TS +TS ++ S +SSV + +TP TS T+ + P
Sbjct: 3207 STTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITS 3266
Query: 246 SS 251
SS
Sbjct: 3267 SS 3268
Score = 27.5 bits (58), Expect = 0.67
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 780 ITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 839
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P SS
Sbjct: 840 ITSSTVVNSSTPITSSS 856
Score = 27.5 bits (58), Expect = 0.67
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 1668 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 1727
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 1728 ITSSTVVNSSTPITSST 1744
Score = 27.5 bits (58), Expect = 0.67
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + S + TS +TS ++ S +SSV + A +TP
Sbjct: 3408 ITSSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTP 3467
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P + S+
Sbjct: 3468 ITSSSVLNSSTPISSST 3484
Score = 27.1 bits (57), Expect = 0.88
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 1188 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTP 1247
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1248 ITSSSVLNSSTPITSST 1264
Score = 27.1 bits (57), Expect = 0.88
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 2496 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 2555
Query: 201 TTSCTMHRSPPP 236
TS T+ S P
Sbjct: 2556 ITSSTVVNSSTP 2567
Score = 27.1 bits (57), Expect = 0.88
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS ++ S +SSV + +TP
Sbjct: 2796 ITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTP 2855
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2856 ITSSSVLNSSTPITSST 2872
Score = 26.6 bits (56), Expect = 1.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETV-TTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV TS +TS ++ S +SSV + +TP
Sbjct: 1512 ITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1571
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1572 ITSSSVVNSSTPITSST 1588
Score = 26.2 bits (55), Expect = 1.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 1728 ITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 1787
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1788 ITSSSVLNSSTPITSST 1804
Score = 26.2 bits (55), Expect = 1.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 1824 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 1883
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1884 ITSSSVLNSSTPITSST 1900
Score = 26.2 bits (55), Expect = 1.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 2016 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 2075
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2076 ITSSSVLNSSTPITSST 2092
Score = 25.8 bits (54), Expect = 2.0
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + TS +TS ++ S +SSV + +TP
Sbjct: 432 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 491
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 492 ITSSTVVNSSTPITSST 508
Score = 25.8 bits (54), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 1044 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTP 1103
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1104 ITSSSVLNSSTPITSST 1120
Score = 25.8 bits (54), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+S+ +N + + S TV S T +TS + S +SSV + +TP
Sbjct: 1884 ITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTP 1943
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P SS
Sbjct: 1944 ITSSTVVNSSTPITSSS 1960
Score = 25.8 bits (54), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+S+ +N + + S TV S T +TS + S +SSV + +TP
Sbjct: 2076 ITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTP 2135
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P SS
Sbjct: 2136 ITSSTVVNSSTPITSSS 2152
Score = 25.8 bits (54), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 2280 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2339
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2340 ITSSSVLNSSTPITSST 2356
Score = 25.8 bits (54), Expect = 2.0
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 2544 ITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTP 2603
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2604 ITSSTVVNSSTPITSST 2620
Score = 25.8 bits (54), Expect = 2.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S TV S T +TS + S +SSV + +TP
Sbjct: 2688 ITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2747
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2748 ITSSSVLNSSTPITSST 2764
Score = 25.4 bits (53), Expect = 2.7
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 27 KLTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNT 197
++T+ T VN + + S +V S T +TS ++ S +SSV + +T
Sbjct: 371 QITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSST 430
Query: 198 PTTSCTMHRSPPPANRSS 251
P TS T+ S P S+
Sbjct: 431 PITSSTVLNSSTPITSST 448
Score = 25.4 bits (53), Expect = 2.7
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS + S +SSV + +TP
Sbjct: 840 ITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 899
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 900 ITSSTVVNSSTPITSST 916
Score = 25.4 bits (53), Expect = 2.7
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS + S +SSV + +TP
Sbjct: 1584 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTP 1643
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + PP S+
Sbjct: 1644 ITSSTALNTSPPITSST 1660
Score = 25.4 bits (53), Expect = 2.7
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S + TS +TS ++ S +SSV T +TP TS T+ + P
Sbjct: 1971 STALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITS 2030
Query: 246 SS 251
S+
Sbjct: 2031 ST 2032
Score = 25.4 bits (53), Expect = 2.7
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS + S +SSV + +TP
Sbjct: 2448 ITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 2507
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2508 ITSSTVVNSSTPITSST 2524
Score = 25.0 bits (52), Expect = 3.5
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S V TS +TS + S +SSV + +TP TS T+ S P
Sbjct: 1119 STVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 1178
Query: 246 SS 251
S+
Sbjct: 1179 ST 1180
Score = 25.0 bits (52), Expect = 3.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + S V +S +TS + S +SSV + +TP
Sbjct: 1560 ITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 1619
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1620 ITSSSVLNSSTPITSST 1636
Score = 25.0 bits (52), Expect = 3.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 1968 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTP 2027
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2028 ITSSTVVNSSTPITSST 2044
Score = 25.0 bits (52), Expect = 3.5
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S V TS ++TS ++ S +SSV + +TP TS ++ S P
Sbjct: 2415 STVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITS 2474
Query: 246 SS 251
S+
Sbjct: 2475 ST 2476
Score = 25.0 bits (52), Expect = 3.5
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S V TS +TS + S +SSV + +TP TS T+ S P
Sbjct: 2763 STVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 2822
Query: 246 SS 251
S+
Sbjct: 2823 ST 2824
Score = 24.6 bits (51), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 2640 ITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2699
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2700 ITSSTVVNSSTPITSST 2716
Score = 24.6 bits (51), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 2868 ITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2927
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 2928 ITSSTVVNSSTPITSST 2944
Score = 24.6 bits (51), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 2964 ITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 3023
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 3024 ITSSTVVNSSTPITSST 3040
Score = 24.6 bits (51), Expect = 4.7
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + +S +TS ++ S +SSV + +TP
Sbjct: 3324 ITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTP 3383
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + P SS
Sbjct: 3384 ITSSTALNTSTPITSSS 3400
Score = 24.2 bits (50), Expect = 6.2
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + +S +TS + S +SSV + +TP
Sbjct: 684 ITSSTALNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTP 743
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P SS
Sbjct: 744 ITSSSVLNSSTPITSSS 760
Score = 24.2 bits (50), Expect = 6.2
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S V TS +TS ++ S +SSV + +TP TS ++ S P
Sbjct: 831 STVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITS 890
Query: 246 SS 251
S+
Sbjct: 891 ST 892
Score = 24.2 bits (50), Expect = 6.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 1068 ITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 1127
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + P SS
Sbjct: 1128 ITSSTALNTSTPITSSS 1144
Score = 24.2 bits (50), Expect = 6.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS + S +SSV + +TP
Sbjct: 1776 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTP 1835
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ S P S+
Sbjct: 1836 ITSSTVVNSSTPITSST 1852
Score = 24.2 bits (50), Expect = 6.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + TS +TS ++ S +SSV + +TP
Sbjct: 1896 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTP 1955
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1956 ITSSSVLNSSTPITSST 1972
Score = 24.2 bits (50), Expect = 6.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS + S +SSV + +TP
Sbjct: 1944 ITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTP 2003
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2004 ITSSSVLNSSTPITSST 2020
Score = 24.2 bits (50), Expect = 6.2
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + TS +TS ++ S +SSV + +TP
Sbjct: 2088 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTP 2147
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 2148 ITSSSVLNSSTPITSST 2164
Score = 24.2 bits (50), Expect = 6.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + + S +V S T +TS + S +SSV + +TP
Sbjct: 2136 ITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTP 2195
Query: 201 TTSCTMHRSPPPANRSS 251
TS T+ + P S+
Sbjct: 2196 ITSSTVVNTSTPITSST 2212
Score = 23.8 bits (49), Expect = 8.2
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS + S +SSV + +TP
Sbjct: 600 ITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTP 659
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + P SS
Sbjct: 660 ITSSTALNTSTPITSSS 676
Score = 23.8 bits (49), Expect = 8.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 732 ITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTP 791
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 792 ITSSSVLNSSTPITSST 808
Score = 23.8 bits (49), Expect = 8.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 972 ITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTP 1031
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1032 ITSSSVLNSSTPITSST 1048
Score = 23.8 bits (49), Expect = 8.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 1212 ITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTP 1271
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + P SS
Sbjct: 1272 ITSSTALNTSIPITSSS 1288
Score = 23.8 bits (49), Expect = 8.2
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N ++ S + +S +TS + S +SSV + +TP
Sbjct: 1272 ITSSTALNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTP 1331
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 1332 ITSSSVLNSSTPITSST 1348
Score = 23.8 bits (49), Expect = 8.2
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 66 SETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANR 245
S V TS +TS + S +SSV + +TP TS ++ S P
Sbjct: 2355 STVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITS 2414
Query: 246 SS 251
S+
Sbjct: 2415 ST 2416
Score = 23.8 bits (49), Expect = 8.2
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFA--VFSETVTTSLT-MTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + + S +V S T +TS ++ S +SSV + +TP
Sbjct: 2712 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP 2771
Query: 201 TTSCTMHRSPPPANRSS 251
TS T + P SS
Sbjct: 2772 ITSSTALNTSTPITSSS 2788
Score = 23.8 bits (49), Expect = 8.2
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST VN + S + TS +TS ++ S +SSV + +TP
Sbjct: 3024 ITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTP 3083
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S SS
Sbjct: 3084 ITSSSVLNSSTAITSSS 3100
Score = 23.8 bits (49), Expect = 8.2
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + +S +TS ++ S +SSV + +TP
Sbjct: 3072 ITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSILNSSTP 3131
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 3132 ITSSSILNSSTPITSST 3148
Score = 23.8 bits (49), Expect = 8.2
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + +S +TS ++ S +SSV + +TP
Sbjct: 3204 ITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 3263
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 3264 ITSSSVLNSSTPITSST 3280
Score = 23.8 bits (49), Expect = 8.2
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 30 LTASTWVNFAV---FSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTP 200
+T+ST +N + S + +S +TS + S +SSV + +TP
Sbjct: 3300 ITSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTP 3359
Query: 201 TTSCTMHRSPPPANRSS 251
TS ++ S P S+
Sbjct: 3360 VTSSSVLNSSTPITSST 3376
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 26.6 bits (56), Expect = 1.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 56 RGLLGDGNNEPYDDFRLPNGKI-CTSESEF 142
RG+L D +N DDF L N +I SE EF
Sbjct: 38 RGILYDSDNRVVDDFFLNNKRIVLDSEIEF 67
>SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 3.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 218 ASLPPACEQVFGEYRRSGP 274
A +PP C+ FG R+GP
Sbjct: 116 ADIPPECDFYFGSEIRNGP 134
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 3.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 333 AGDGVNTRLS----KRRHVHEQRQGPERRYSPKTCSQAGGSDAS 214
+G +NT L+ + R H RQG +R+ K +GGS S
Sbjct: 12 SGSKINTELAVPIFQSRRRHRPRQGLKRKKGFKRDDDSGGSSES 55
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 24.2 bits (50), Expect = 6.2
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 81 TSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANRSS 251
TS + T+ + +++S T + P+T +TSCT S PP SS
Sbjct: 73 TSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPST-STSCTTSTSIPPTGGSS 128
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 24.2 bits (50), Expect = 6.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 104 LPNGKICTSESEFGNAYRLXRSCPQVQAPEHSHHQLH 214
+P+G+ S S ++ L + P V P H H +H
Sbjct: 58 IPHGRYTWSTSPDTDSSHLPSTPPTVDIPFHHPHTIH 94
>SPBC2G5.07c |rpc25||DNA-directed RNA polymerase III complex subunit
Rpc25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 203
Score = 23.8 bits (49), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 283 FMDMSPFRQACIHAVTGTDA 342
F+D+SP R A+TGT+A
Sbjct: 159 FVDISPKRNKNATAITGTEA 178
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 216 MHRSPPPANRSSGNIAAQDPVFVHG 290
+H S PP + Q +FVHG
Sbjct: 240 LHSSSPPPRSNHSVTLVQGKIFVHG 264
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,321,438
Number of Sequences: 5004
Number of extensions: 24449
Number of successful extensions: 171
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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