Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0423
(359 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0209 + 22014556-22015308 31 0.36
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 1.1
05_05_0103 - 22408832-22410041,22410500-22410628,22411600-224117... 29 1.1
11_02_0150 - 8816714-8817806,8817993-8818126 29 1.5
12_01_0085 - 689489-689935 28 1.9
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 28 1.9
04_04_0788 + 28064684-28066584,28066692-28066815,28066908-280672... 28 2.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 25 2.9
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 25 4.1
11_02_0037 - 7613632-7613727,7614452-7615507 27 4.4
08_02_0885 + 22268287-22268988 27 4.4
05_07_0012 + 27041475-27042476 27 4.4
03_02_0269 + 7001891-7002212,7003598-7004037 27 4.4
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 27 5.9
07_03_1450 + 26620178-26620456,26622122-26622775 27 5.9
06_03_1219 - 28491185-28494415 27 5.9
09_04_0436 - 17558603-17559265,17559322-17559384 26 7.7
08_02_1622 - 28309472-28309871,28310362-28310399 26 7.7
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 26 7.7
03_06_0067 + 31430669-31430852,31430954-31431099,31431227-314316... 26 7.7
03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676 26 7.7
02_03_0408 - 18692176-18692278,18692590-18692669,18692764-186928... 26 7.7
>03_05_0209 + 22014556-22015308
Length = 250
Score = 30.7 bits (66), Expect = 0.36
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 18 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNT 197
A + L + + V + VFS T+ L ++M + AL S+ A ++C +
Sbjct: 36 ALISLVSPSSVEYTVFSSTLPAPLRALGSFVMSKKALFVLSNAIFLFLAADYYRCFFSLS 95
Query: 198 PTTS 209
P+TS
Sbjct: 96 PSTS 99
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 150 RTVWXAAVHKCKXPNTPTTSCTMHRSPPPANRSSGNI 260
R V AA + P+ +S HRSPPP++ +S I
Sbjct: 72 RAVGAAAAVAARVPSDVGSSSRQHRSPPPSSTASDAI 108
>05_05_0103 -
22408832-22410041,22410500-22410628,22411600-22411703,
22411780-22411874,22412483-22412540,22412741-22412792,
22415399-22415532
Length = 593
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 173 PQVQAPEHSHHQLHDASL--PPACEQVFGEYRRSGP 274
P +P S H A+L P A + +FG R+SGP
Sbjct: 15 PVASSPSVSEGSAHAAALASPTAADSIFGRRRKSGP 50
>11_02_0150 - 8816714-8817806,8817993-8818126
Length = 408
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -3
Query: 330 GDGVNTRLSKRRHVHEQRQGPERRYSPKTCSQAGGSDA--SCSWWWECSGACTC 175
GD N R R+HVH + YS + DA S WW + GAC C
Sbjct: 75 GDPDNPRTEARQHVHMLSKCLPC-YSCPLVHENDADDAVKSQKWWQKHCGACCC 127
>12_01_0085 - 689489-689935
Length = 148
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 173 PQVQAPEHSHH-QLHDASLPPACEQVFGEYRRSGPCLCSWTCR 298
P++ P+H+HH + D S C GE C CR
Sbjct: 52 PKIWLPDHAHHRRRRDESSEMECSICLGELEEGERCCTLAACR 94
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 28.3 bits (60), Expect = 1.9
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +3
Query: 54 FAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPP 233
F +FS T S T +S SA+ +A++ T T NT T S + +PP
Sbjct: 77 FLLFSTTALYSSTSSSS----SSAVLRATTTTTTTTTTTT---TTTNTFTLSFQANPNPP 129
Query: 234 PANRSSGNIAAQDPVFVHGH 293
P+N S N A D GH
Sbjct: 130 PSNLS--NHTALDAAGAAGH 147
>04_04_0788 +
28064684-28066584,28066692-28066815,28066908-28067285,
28067286-28067488,28067615-28067897
Length = 962
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -3
Query: 315 TRLSKRRHVHEQRQGPERRYSPKTCSQAGGSDASCSWWWECSGACTCGQLRXRRYALPNS 136
T ++ R + Q P +R+SP T S + S A S CS A +R + N+
Sbjct: 166 TSMNASRELRVSFQDPHKRFSPSTSSASTSSYAGDSRNQACSTAEAAEVIRCTSMSTGNN 225
Query: 135 L 133
L
Sbjct: 226 L 226
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 228 PPPANRSSGNIAAQDPV 278
PPPANRS+G A P+
Sbjct: 718 PPPANRSNGPSAPAPPL 734
Score = 21.0 bits (42), Expect(2) = 2.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 195 TPTTSCTMHRSPPP 236
TPT + T + PPP
Sbjct: 678 TPTGAATSSKGPPP 691
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 25.0 bits (52), Expect(2) = 4.1
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = -3
Query: 207 WWWECSGACTCGQLRXRR 154
WWW G+C R R
Sbjct: 93 WWWSIGGSCAVAPRRHAR 110
Score = 20.6 bits (41), Expect(2) = 4.1
Identities = 6/14 (42%), Positives = 6/14 (42%)
Frame = -3
Query: 234 AGGSDASCSWWWEC 193
AGG WW C
Sbjct: 50 AGGGRGDLGAWWSC 63
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 86 PYDDFRLPNGKICTSESEFGNAYRLXRSCPQVQAPE-HSHHQLHDASLP 229
P+ + G + +G AY R+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>08_02_0885 + 22268287-22268988
Length = 233
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 87 LTMTSGYLMERSALRKASSVTR--TVWXAAVHKCKXPNTPTTSCTMHRSPPPANRSSGNI 260
LTMT +M KA+ + T A +C+ P+ +C M PP N+
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPPEGWMKANV 90
>05_07_0012 + 27041475-27042476
Length = 333
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 324 GVNTRLSKRRHVHEQRQGPERRYSPKTCSQAGG 226
G +T S H+H+Q R+ + T S +GG
Sbjct: 112 GTSTSSSSLSHLHQQSSSTRRQSNASTSSSSGG 144
>03_02_0269 + 7001891-7002212,7003598-7004037
Length = 253
Score = 27.1 bits (57), Expect = 4.4
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Frame = +2
Query: 29 ANGFYLGKLRGLLGDGNNEPYDDFRLPNGKIC--TSESEFGNAYRLXR---SCPQVQA-P 190
A+G+ G +GL G +P + R C T + F A R R CP+V A P
Sbjct: 74 ADGWVDGSRKGLTS-GLTDPTCERREERLPFCPTTGWTLFQRASRFGRCSKKCPEVDAVP 132
Query: 191 EHSHHQLHDASLPPACEQVFGEYRRSGPCLCSWTCRLLDRRVFT 322
+H + +PP E SGP L + ++L FT
Sbjct: 133 KHVQARF-GVPMPPCGEAPSSTLLSSGPMLVQGSGKVLPCPPFT 175
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -3
Query: 333 AGDGVNTRLSKRRHVHEQRQGPERRYSPKTCSQAGGSDASCSW 205
AGD ++ LS R H+ + +S + + G++ CSW
Sbjct: 31 AGDDLHALLSFRSHIAKDHSDALSSWSVVSNGTSDGTNGFCSW 73
>07_03_1450 + 26620178-26620456,26622122-26622775
Length = 310
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 173 PQVQAPEHSHHQLHDASLPP 232
P P H HH L+ SLPP
Sbjct: 133 PMPHQPYHHHHHLNPFSLPP 152
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 227 PPACEQVFGEYRRSGPCLCSW 289
PPA + + GE++RS C C+W
Sbjct: 44 PPAGDGIVGEWQRSPDC-CTW 63
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 126 LRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANRSSGNIAAQ 269
LR AS+ T +A TPT S + +PPP R + A++
Sbjct: 155 LRLASASPSTTSSSATPPPNASATPTPSLSWRTTPPPCQRHPSSRASR 202
>08_02_1622 - 28309472-28309871,28310362-28310399
Length = 145
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -3
Query: 318 NTRLSKRRHVHEQRQGPERRYSPKTCSQAGGSDASCSWWWECSGACTCGQLRXRR 154
+TR + R ++ R G + + S+ GG WWW G + R RR
Sbjct: 5 STRRASDRGTYQTRPGAAGTVAAQE-SRGGGKWRQGVWWWRWRGGRGAEEGRQRR 58
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 26.2 bits (55), Expect = 7.7
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 81 TSLTMTS-GYLMERSALRKASSVTRTVWXAAVHKCKXPNTPTTSCTMHRSPPPANRSSGN 257
T L MTS G ++ TVW AA+ P PTT + PP A+ S
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFAL---PPGASLSVAG 136
Query: 258 IAA 266
+ A
Sbjct: 137 VTA 139
>03_06_0067 +
31430669-31430852,31430954-31431099,31431227-31431614,
31431707-31431783,31431922-31432146
Length = 339
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 189 PNTPTTSCTMHRSPPPANRSSGNIAAQDPVFVHGHV 296
P P HRSPPPA ++ A D H HV
Sbjct: 152 PAMPLLPPASHRSPPPAAAAAATAAGDD----HRHV 183
>03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676
Length = 240
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 252 PKTCSQAGGSDASCSWWWECSGACTCGQLRXRRYALPNSLSEVQIF 115
P T + GG+D S + GAC G L +RY + N+ +F
Sbjct: 25 PGTATFYGGADGSGTM----GGACGYGNLYDQRYGINNAALSTPLF 66
>02_03_0408 -
18692176-18692278,18692590-18692669,18692764-18692890,
18694016-18694051,18695832-18696085
Length = 199
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 170 CPQVQAPEHSHHQLHDASLPPACEQVFGEYRRSGPCL 280
CP + H +H P+C + E+++S PCL
Sbjct: 120 CPSMDCLWHKYHYC------PSCGEKVAEFKKSDPCL 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,726,576
Number of Sequences: 37544
Number of extensions: 204624
Number of successful extensions: 801
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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