Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0423
(359 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 30 0.40
At5g16560.1 68418.m01938 myb family transcription factor (KAN1) ... 29 1.2
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 28 1.6
At4g15730.1 68417.m02394 expressed protein 28 2.1
At1g70280.2 68414.m08086 NHL repeat-containing protein contains ... 28 2.1
At1g70280.1 68414.m08085 NHL repeat-containing protein contains ... 28 2.1
At1g48040.1 68414.m05354 protein phosphatase 2C-related / PP2C-r... 28 2.1
At1g16680.1 68414.m01997 DNAJ heat shock N-terminal domain-conta... 28 2.1
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 2.8
At3g16730.1 68416.m02136 expressed protein ; expression supporte... 27 3.8
At5g14690.1 68418.m01721 expressed protein predicted protein, Ar... 27 5.0
At4g31050.1 68417.m04409 lipoyltransferase (LIP2p) identical to ... 27 5.0
At2g47460.1 68415.m05923 myb family transcription factor (MYB12)... 27 5.0
At5g03310.1 68418.m00282 auxin-responsive family protein similar... 26 6.6
At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family... 26 6.6
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 26 8.7
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 26 8.7
At2g32415.1 68415.m03961 3'-5' exonuclease domain-containing pro... 26 8.7
At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969... 26 8.7
At1g33410.1 68414.m04136 expressed protein 26 8.7
At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7) c... 26 8.7
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 89 YDDFRL-PNGKICTSESEFGNAYRLXRSCPQVQAPEHSHHQLHDASLPPACEQ 244
Y FR P+ K C S S F Y+ CP S H + D LPP EQ
Sbjct: 221 YSQFRSSPSPKCCVSLSAF--YYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQ 271
>At5g16560.1 68418.m01938 myb family transcription factor (KAN1)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI1 (KAN1) GI:15723590
Length = 403
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 119 ICTSESEFGNAYRLXRSCPQVQ-APEHSHH 205
I S S + NAYR +S P+++ P H HH
Sbjct: 147 ILNSSSGYNNAYRSLQSSPRLKGVPLHHHH 176
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 4706
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 203 HQLHDASLPPACEQVFGEYRRSGP-CLCSWTCRLLDRRVFTPSPAQTXL 346
HQL D +P +SG C+C +C LL++ F PA L
Sbjct: 2016 HQLVDREVPEGVYSKLLAVAQSGESCICLLSCNLLEKLFFKLLPADWHL 2064
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 183 KXPNTPTTSCTMHRSPPPAN-RSSGNIAAQDP 275
K + P TSC + R+ P N ++SG++ AQ P
Sbjct: 101 KFQSPPATSCKLVRNQDPQNYQTSGSLLAQAP 132
>At1g70280.2 68414.m08086 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 509
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 83 EPYDDFRLPNGKICTSESEFGNAYRLXRSCPQVQAP 190
EPY LPNG++ +SE N Y++ S P
Sbjct: 84 EPYSIEVLPNGELLILDSENSNIYKISSSLSLYSRP 119
>At1g70280.1 68414.m08085 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 447
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 83 EPYDDFRLPNGKICTSESEFGNAYRLXRSCPQVQAP 190
EPY LPNG++ +SE N Y++ S P
Sbjct: 22 EPYSIEVLPNGELLILDSENSNIYKISSSLSLYSRP 57
>At1g48040.1 68414.m05354 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36698 GI:3643085 from [Mesembryanthemum
crystallinum]
Length = 377
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 339 VCAGDGVNTRLSKRRHVHEQRQGPERRYSPKTCSQAGGSDAS 214
+ A DG+ LS + V RQG R P+ C+ G +A+
Sbjct: 287 ILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAA 328
>At1g16680.1 68414.m01997 DNAJ heat shock N-terminal
domain-containing protein / S-locus protein, putative
similar to S-locus protein 5 GI:6069485 from [Brassica
rapa]; contains Pfam profile PF00226 DnaJ domain
Length = 496
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 205 VVGVFGXLHLWTAAXQTVRVT-ELAFRSADLSIR*PEVIVRLVVTVSEKT 59
+VG+FG L LW V ++ LAF S D+ I +++ TVSEKT
Sbjct: 108 IVGLFGILILWILGWPGVILSMNLAFLSNDIFI----CLLQWCDTVSEKT 153
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 189 PNTPTTSCTMHRSPPPANRSSGNIAAQDP 275
P TP TS + +PPP S ++ A DP
Sbjct: 134 PTTPITSPSPPTNPPPPPESPPSLPAPDP 162
>At3g16730.1 68416.m02136 expressed protein ; expression supported
by MPSS
Length = 695
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 183 KXPNTPTTSCTMHRSPPPANRSSGNIAAQ 269
K +P T H SPPP R++ ++++Q
Sbjct: 618 KRAKSPITKGKSHESPPPKKRNTCSVSSQ 646
>At5g14690.1 68418.m01721 expressed protein predicted protein,
Arabidopsis thaliana
Length = 217
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 336 CAGDGVNTRLSKRRHVHEQRQGPERRYSPKTC-SQAGGSDASC 211
C D V+ +RRH H G E + S K C S A + A C
Sbjct: 18 CQNDAVDEENRRRRHNH-HTHGDEVKCSSKRCRSWAAAAIADC 59
>At4g31050.1 68417.m04409 lipoyltransferase (LIP2p) identical to
lipoyltransferase (LIP2p) [Arabidopsis thaliana]
GI:15887052; supporting cDNA gi|15887051|dbj|AB072390.1|
Length = 278
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 44 LGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 160
+G ++GLL DG + DD RL + + EF A++L
Sbjct: 227 VGNIKGLLEDGEHGMVDDLRLIDIVHESLLKEFSEAFQL 265
>At2g47460.1 68415.m05923 myb family transcription factor (MYB12)
similar to myb-related DNA-binding protein GI:1020155
from [Arabidopsis thaliana]
Length = 371
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 143 GNAYRLXRSCPQVQAPEHSHHQLHDAS 223
GN L +SCP V++ + HQ++DAS
Sbjct: 277 GNLDCLLQSCPSVESFLNYDHQVNDAS 303
>At5g03310.1 68418.m00282 auxin-responsive family protein similar to
indole-3-acetic acid induced protein ARG7 (SP:P32295)
[Vigna radiata]
Length = 114
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 56 RGLLGDGNNEPYDDFRLPNGKICTSESE 139
R LL +E YDDF + K+C + E
Sbjct: 71 RALLDQSKDEAYDDFTSGDSKLCIACDE 98
>At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family
protein similar to SP|Q28141 ATP-dependent RNA helicase
A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos
taurus}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 1015
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 118 DLHFGKRVR*RVPSGPQLSTSASXRTL 198
D+HF + R PS LSTS+S TL
Sbjct: 825 DMHFTSSIANRYPSWRILSTSSSSETL 851
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 189 PNTPTTSCTMHRSPPPANRSSG 254
P+TPTT+C PPP+ SSG
Sbjct: 58 PSTPTTAC----PPPPSPPSSG 75
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 216 MHRSPPPANRSSGNIAAQD 272
+ RSPPP +R IAA D
Sbjct: 983 LSRSPPPCSRRGAGIAASD 1001
>At2g32415.1 68415.m03961 3'-5' exonuclease domain-containing
protein similar to SP|Q12149 Exosome complex exonuclease
RRP6 (EC 3.1.13.-) (Ribosomal RNA processing protein 6)
{Saccharomyces cerevisiae}
Length = 880
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 152 YRLXRSCPQVQAPEH-SHHQLHDASL 226
YR+ SC +V PEH H+ HD L
Sbjct: 583 YRIIPSCYRVHFPEHLKSHRSHDIVL 608
>At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 347
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 244 GLRGISPLRTLSLFMDMSPFRQACIHAVTGTD 339
GL+ + RTL D SPF +H VT D
Sbjct: 236 GLKSLK-CRTLIFVGDQSPFHSETLHMVTALD 266
>At1g33410.1 68414.m04136 expressed protein
Length = 1459
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 39 STWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWXAAVHKC 182
S W+ F T S +M + ++ S+L+ SS+ + W A + KC
Sbjct: 709 SEWLIILFFVTTPAESTSMED-FSLKLSSLQIDSSIDKRSWNAMLGKC 755
>At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7)
contains Pfam profiles: PF05033: Pre-SET motif, PF00856
SET domain; identical to cDNA SUVH7 (SUVH7) GI:13517754
Length = 693
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 280 KTGS*AAIFPEDLFAGGGERCIVQLVVGVFGXLHLWTAAXQTV 152
+ G+ I D+F GE C+V L +G + +TAA V
Sbjct: 225 RIGAVPGIHVGDIFYYWGEMCLVGLHKSNYGGIDFFTAAESAV 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,353,930
Number of Sequences: 28952
Number of extensions: 146251
Number of successful extensions: 516
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 469342752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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