Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0421
(844 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 104 4e-22
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 104 4e-22
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 104 4e-22
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 104 4e-22
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 104 4e-22
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 104 4e-22
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 104 5e-22
AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5 p... 81 4e-15
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 76 1e-13
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 76 1e-13
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 76 1e-13
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 76 1e-13
AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5 p... 72 2e-12
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 95 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 154
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 155 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 192
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 29 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 88
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 89 SSAFDEVYPALPSDVQTAIKS 109
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 104 bits (250), Expect = 4e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 104 bits (249), Expect = 5e-22
Identities = 45/98 (45%), Positives = 68/98 (69%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 77 VYPALPSDVQTAIKSELLMIIQMETQXSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 136
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
F S+Q+ ++EA + +F + PG+FGN+Q LDVIK
Sbjct: 137 FDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIK 174
Score = 72.5 bits (170), Expect = 2e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SAXXXXXXXXXXXXQQTVLRN 258
S+ QT +++
Sbjct: 71 SSAFDEVYPALPSDVQTAIKS 91
>AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5
protein.
Length = 126
Score = 81.4 bits (192), Expect = 4e-15
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + + +LL+ +QM+ +R+KVCD+ +ELARN ID+DGNNQWPE L+F+
Sbjct: 48 VYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQWPEGLKFL 107
Query: 393 FTCASAQDPNIKEAGIRMF 449
F S+Q+ ++EA + +F
Sbjct: 108 FDSVSSQNVGLREAALHIF 126
Score = 28.7 bits (61), Expect(2) = 0.55
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAE 75
FY LL LLS DN +R QAE
Sbjct: 9 FYLLLGNLLSPDNVVRKQAE 28
Score = 24.6 bits (51), Expect(2) = 0.55
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 154 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLRN 258
+ RQ AAVLLRRL S+ QT +++
Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKS 62
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 76.2 bits (179), Expect = 1e-13
Identities = 32/98 (32%), Positives = 59/98 (60%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+
Sbjct: 89 VYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFL 148
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
+++ + E + +F PG+FG ++ +LD+IK
Sbjct: 149 IDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 186
Score = 56.8 bits (131), Expect = 9e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL
Sbjct: 23 FYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLL 82
Query: 196 SA 201
S+
Sbjct: 83 SS 84
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 76.2 bits (179), Expect = 1e-13
Identities = 32/98 (32%), Positives = 59/98 (60%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+
Sbjct: 85 VYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFL 144
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
+++ + E + +F PG+FG ++ +LD+IK
Sbjct: 145 IDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 182
Score = 56.8 bits (131), Expect = 9e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL
Sbjct: 19 FYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLL 78
Query: 196 SA 201
S+
Sbjct: 79 SS 80
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 76.2 bits (179), Expect = 1e-13
Identities = 32/98 (32%), Positives = 59/98 (60%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+
Sbjct: 85 VYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFL 144
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
+++ + E + +F PG+FG ++ +LD+IK
Sbjct: 145 IDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 182
Score = 56.8 bits (131), Expect = 9e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL
Sbjct: 19 FYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLL 78
Query: 196 SA 201
S+
Sbjct: 79 SS 80
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 76.2 bits (179), Expect = 1e-13
Identities = 32/98 (32%), Positives = 59/98 (60%)
Frame = +3
Query: 213 VLPEIAI*AADSAQEQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFM 392
V P + + +L+L ++++ +R+K+CD+ + LARN ID+DG N WPE L+F+
Sbjct: 85 VYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFL 144
Query: 393 FTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIK 506
+++ + E + +F PG+FG ++ +LD+IK
Sbjct: 145 IDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIK 182
Score = 56.8 bits (131), Expect = 9e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA LLRRL
Sbjct: 19 FYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLL 78
Query: 196 SA 201
S+
Sbjct: 79 SS 80
>AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5
protein.
Length = 76
Score = 72.1 bits (169), Expect = 2e-12
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +1
Query: 16 FYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLLRRLF 195
FY LL LLS DN +R QAE+ Y NIP ++K+ L+ +I+N AE+ RQ AAVLLRRL
Sbjct: 11 FYLLLGNLLSPDNVVRKQAEETYENIPGQSKITFLLQAIRNTTAAEEARQMAAVLLRRLL 70
Query: 196 SA 201
S+
Sbjct: 71 SS 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,239,951
Number of Sequences: 237096
Number of extensions: 2316860
Number of successful extensions: 8451
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8451
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -