Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0421
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro...   108   8e-24
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ...   108   8e-24
AY071174-1|AAL48796.1|  195|Drosophila melanogaster RE22911p pro...    30   4.6  
AE014297-892|AAF54348.1|  195|Drosophila melanogaster CG9740-PA ...    30   4.6  
U57758-1|AAB49932.1|  360|Drosophila melanogaster putative thyro...    29   6.0  
AY069836-1|AAL39981.1|  444|Drosophila melanogaster SD08021p pro...    29   6.0  
AF129079-1|AAD28604.1|  444|Drosophila melanogaster COP9 signalo...    29   6.0  
AE014134-1594|AAF52736.1|  444|Drosophila melanogaster CG9556-PB...    29   6.0  
AE014134-1593|AAN10685.1|  444|Drosophila melanogaster CG9556-PA...    29   6.0  

>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
           protein.
          Length = 1000

 Score =  108 bits (260), Expect = 8e-24
 Identities = 42/84 (50%), Positives = 69/84 (82%)
 Frame = +3

Query: 255 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 434
           +Q+LL +Q +++  LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++  P ++E+
Sbjct: 88  QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147

Query: 435 GIRMFTSVPGVFGNRQTENLDVIK 506
            +R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +1

Query: 4   DXVXFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLL 183
           D   F QLL +LLSTDND+R QAE+AYNN+  E KV HL+ +IQN   +E+ RQ AAVLL
Sbjct: 4   DQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLL 63

Query: 184 RRLFS 198
           RRLF+
Sbjct: 64  RRLFT 68


>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
           protein.
          Length = 1105

 Score =  108 bits (260), Expect = 8e-24
 Identities = 42/84 (50%), Positives = 69/84 (82%)
 Frame = +3

Query: 255 EQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPEFLQFMFTCASAQDPNIKEA 434
           +Q+LL +Q +++  LRRK+C+VV+E+ARN ID+D NNQWP+ LQF+F CA++  P ++E+
Sbjct: 88  QQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQES 147

Query: 435 GIRMFTSVPGVFGNRQTENLDVIK 506
            +R+F+SVP +FGN++ + +D+IK
Sbjct: 148 ALRIFSSVPSIFGNQEAQYIDLIK 171



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +1

Query: 4   DXVXFYQLLNTLLSTDNDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAEDVRQTAAVLL 183
           D   F QLL +LLSTDND+R QAE+AYNN+  E KV HL+ +IQN   +E+ RQ AAVLL
Sbjct: 4   DQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAVLL 63

Query: 184 RRLFS 198
           RRLF+
Sbjct: 64  RRLFT 68


>AY071174-1|AAL48796.1|  195|Drosophila melanogaster RE22911p
           protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 105 KSSAPSEFNSKCRHCRRCASN 167
           K   P ++ + C HCR+C SN
Sbjct: 32  KDGEPKKYRALCTHCRKCQSN 52


>AE014297-892|AAF54348.1|  195|Drosophila melanogaster CG9740-PA
           protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 105 KSSAPSEFNSKCRHCRRCASN 167
           K   P ++ + C HCR+C SN
Sbjct: 32  KDGEPKKYRALCTHCRKCQSN 52


>U57758-1|AAB49932.1|  360|Drosophila melanogaster putative thyroid
           receptor interactingprotein protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  LLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
           L N L+ +  N   SQ    Y N P    + +LVNS QN DI E
Sbjct: 283 LANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326


>AY069836-1|AAL39981.1|  444|Drosophila melanogaster SD08021p
           protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  LLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
           L N L+ +  N   SQ    Y N P    + +LVNS QN DI E
Sbjct: 283 LANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326


>AF129079-1|AAD28604.1|  444|Drosophila melanogaster COP9
           signalosome subunit 2 CSN2 protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  LLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
           L N L+ +  N   SQ    Y N P    + +LVNS QN DI E
Sbjct: 283 LANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326


>AE014134-1594|AAF52736.1|  444|Drosophila melanogaster CG9556-PB,
           isoform B protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  LLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
           L N L+ +  N   SQ    Y N P    + +LVNS QN DI E
Sbjct: 283 LANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326


>AE014134-1593|AAN10685.1|  444|Drosophila melanogaster CG9556-PA,
           isoform A protein.
          Length = 444

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 25  LLNTLLSTD-NDIRSQAEDAYNNIPTETKVVHLVNSIQNADIAE 153
           L N L+ +  N   SQ    Y N P    + +LVNS QN DI E
Sbjct: 283 LANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,801,029
Number of Sequences: 53049
Number of extensions: 722768
Number of successful extensions: 1714
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)