Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0418
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 36 0.050
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 35 0.088
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 35 0.088
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 35 0.088
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 33 0.27
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 33 0.27
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 33 0.27
Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 29 3.3
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 29 3.3
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 28 7.6
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 28 7.6
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.6
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 28 7.6
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 28 7.6
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 28 7.6
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 28 7.6
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 35.5 bits (78), Expect = 0.050
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 295 SINTPSLIAARVIAGIASGGCFVAVPVYVKEISEDAWRGALGSLTITVSKLGVIFVYAVG 474
S+N L+ RV+ GIA G + VPVY+ E + RG L + + G + G
Sbjct: 115 SVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITG 174
Query: 475 MSCSY 489
+ SY
Sbjct: 175 GAFSY 179
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 313 LIAARVIAGIASGGCFVAVPVYVKEISEDAWRGALGSLTITVSKLGVIFVYAVGMSCSY 489
L+ R++ G+A G + VP+YV E S RG L + + +G++ +G + SY
Sbjct: 124 LLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIGGAFSY 182
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 307 PSLIAARVIAGIASGGCFVAVPVYVKEISEDAWRGALGSLTITVSKLGVIFVYAVGM 477
P +I R+I G+ G VP+++ EIS + RG LGSL + + ++ G+
Sbjct: 154 PMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFGL 210
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 307 PSLIAARVIAGIASGGCFVAVPVYVKEISEDAWRGALGSLTITVSKLGVIFVYAVGM 477
P +I R+I G+ G VP+++ EIS + RG LGSL + + ++ G+
Sbjct: 136 PMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFGL 192
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 151 GLLGGHSSTTRSYMWDTLLQLRIRSLRQEAVRHRRSL 261
G +GG +T R+Y+W + Q R L E +H SL
Sbjct: 279 GAMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSL 315
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 151 GLLGGHSSTTRSYMWDTLLQLRIRSLRQEAVRHRRSL 261
G +GG +T R+Y+W + Q R L E +H SL
Sbjct: 279 GAMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSL 315
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 151 GLLGGHSSTTRSYMWDTLLQLRIRSLRQEAVRHRRSL 261
G +GG +T R+Y+W + Q R L E +H SL
Sbjct: 279 GAMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSL 315
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 151 GLLGGHSSTTRSYMWDTLLQLRIRSLRQEAVRHRRSL 261
G +GG +T R+Y+W + Q R L E +H SL
Sbjct: 279 GAMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSL 315
>Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical
protein ZK829.9 protein.
Length = 492
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 313 LIAARVIAGIASGGCFVAVPVYVKEISEDAWRGALGSLTIT 435
LIA R+IA + S A+ +Y++EIS + RG + SL T
Sbjct: 125 LIAGRLIAAVFSPLSDAALILYLQEISPSSLRGTMSSLYST 165
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 604 WLLXFRRRIFSK*FGDSGINENIMTWIPLMLRTLF 500
W+ + + FS DS +N NI+TW+ + +F
Sbjct: 265 WVNKYEAKNFSDLLSDSTVNRNILTWLKMWDECVF 299
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +1
Query: 244 RHRRSLLSCVSWTI-KLTSINTPSL---IAARVIAGIASGGCFVAVPVYVKEISEDAWRG 411
R + ++SC+ I L S +PSL + R ++GI +GG V VY+ E R
Sbjct: 152 RRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGGLTVVQMVYMVENIPRHHRM 211
Query: 412 ALGSLTITVSKLGVIFVYAVGMSCSYATNQIVF*ASA 522
+ + +IT S +IF Y ++ ++ T +V A++
Sbjct: 212 WIQN-SITWSPNLIIFPYIAYLAQNWRTLSVVISATS 247
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 29.5 bits (63), Expect = 3.3
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +1
Query: 244 RHRRSLLSCVSWTI-KLTSINTPSL---IAARVIAGIASGGCFVAVPVYVKEISEDAWRG 411
R + ++SC+ I L S +PSL + R ++GI +GG V VY+ E R
Sbjct: 152 RRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGGLTVVQMVYMVENIPRHHRM 211
Query: 412 ALGSLTITVSKLGVIFVYAVGMSCSYATNQIVF*ASA 522
+ + +IT S +IF Y ++ ++ T +V A++
Sbjct: 212 WIQN-SITWSPNLIIFPYIAYLAQNWRTLSVVISATS 247
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 167 TALPLAAICGIPFFSYASDRFGRKLCVI 250
T + A+ +PF S +DR+GRK ++
Sbjct: 151 TIFTIGAVIAVPFMSMLADRYGRKPIIV 178
>Z99278-6|CAD59170.1| 276|Caenorhabditis elegans Hypothetical
protein Y53C12B.5b protein.
Length = 276
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 474 NELFLCHQSNSVLSISGIHVIMFSFMPESPNY 569
N LF+ HQ+ LS+S H+IM S + P +
Sbjct: 227 NNLFVSHQTTYYLSMSLRHLIMSSISSKIPKF 258
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 477 ELFLCHQSNSVLSISGIHVIMFSFMPE-SPNYLLKI 581
++FLCHQ SV I+ + FSF + P+YL I
Sbjct: 291 KMFLCHQFQSVCFSIFIYFMTFSFFVQYLPSYLYDI 326
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 846 QXHPGKKRFGNXQSSNXGXIXKGPREPSTN 757
Q H ++ F N SSN G GPR +N
Sbjct: 1006 QQHQNRRSFNNQSSSNPGNGSTGPRSSRSN 1035
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +2
Query: 41 ATIPTFTYGIQIGWLSPLGPVLKSKQSPADTPLSDDEVSWVATALPLAAICGIPFFSYAS 220
A I F +G +S +L ++P P+ + + P A G F S
Sbjct: 33 AIIGGFLFGYDTSVVS--AAMLYVPEAPGLKPMGTVWKEVIVSITPGMAAVGAWFSGAGS 90
Query: 221 DRFGRKLCVIADPYCHVC 274
DR+GRK +I VC
Sbjct: 91 DRYGRKPIIIGSTLIFVC 108
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 846 QXHPGKKRFGNXQSSNXGXIXKGPREPSTN 757
Q H ++ F N SSN G GPR +N
Sbjct: 764 QQHQNRRSFNNQSSSNPGNGSTGPRSSRSN 793
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 846 QXHPGKKRFGNXQSSNXGXIXKGPREPSTN 757
Q H ++ F N SSN G GPR +N
Sbjct: 700 QQHQNRRSFNNQSSSNPGNGSTGPRSSRSN 729
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform c protein.
Length = 1036
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 846 QXHPGKKRFGNXQSSNXGXIXKGPREPSTN 757
Q H ++ F N SSN G GPR +N
Sbjct: 929 QQHQNRRSFNNQSSSNPGNGSTGPRSSRSN 958
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 846 QXHPGKKRFGNXQSSNXGXIXKGPREPSTN 757
Q H ++ F N SSN G GPR +N
Sbjct: 1006 QQHQNRRSFNNQSSSNPGNGSTGPRSSRSN 1035
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,588,933
Number of Sequences: 27780
Number of extensions: 447108
Number of successful extensions: 1134
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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