Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0417
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 31 0.33
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 31 0.33
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 31 0.33
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 31 0.33
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 1.8
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 28 3.1
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 4.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 7.1
AC025726-34|AAY43986.1| 308|Caenorhabditis elegans Hypothetical... 27 9.4
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 324 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLE 476
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLE 380
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 324 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLE 476
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLE 380
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 324 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLE 476
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLE 380
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 324 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRXTLE 476
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLE 380
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +3
Query: 204 EEIQEXAEGSRREET*LEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMET 383
E ++ E R E+ LE ++ SE + + EA+ K++T
Sbjct: 151 EAVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRATLA--DEAVQ-KLQT 207
Query: 384 HEEK-REAYINELRS---RLKDHLEGVEK 458
++K E Y+N++R LKD+ EG+EK
Sbjct: 208 DKDKLEEEYMNDMRDLKKALKDNQEGLEK 236
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 232 LPSAFSWISSTEGVFSGESARRGTGTPTGSASITSYARPP 113
L S + +ST +SG + +R +G+ TGS+S TS + PP
Sbjct: 98 LRSMVAKYASTSAAWSG-TGQRLSGSTTGSSSSTSSSAPP 136
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 378 ETHEEKR--EAYINELRSRLKDHLEGVEKTR 464
E HE K+ E +NEL R K HL+ +E+ R
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLR 452
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 EVETKSTEIRCQEMSK-GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEXAEGSRRE 242
E E KS++ R ++ K + +E V V + + SP+KTP ++E +E S +
Sbjct: 313 EEEEKSSKKRSKKSKKESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGD 372
Query: 243 E 245
E
Sbjct: 373 E 373
>AC025726-34|AAY43986.1| 308|Caenorhabditis elegans Hypothetical
protein Y71G12B.30 protein.
Length = 308
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -3
Query: 247 VSSLRLPSAFSWISSTEGVFSGESARRGTGTPTGSASITSY 125
++ + +PS W GV + + RG G G A++ +
Sbjct: 207 IADVGIPSDLCWADPVSGVVGFQDSPRGAGHVFGEATVKEF 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,413,787
Number of Sequences: 27780
Number of extensions: 137879
Number of successful extensions: 603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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