Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0416
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   3.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   3.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 273  TTGRRLIDEICQIAAYTPKQTYSQ-YIMPYGDLNP 374
            TT  +LID+ C    Y P ++ S  Y+   G L P
Sbjct: 1197 TTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHLVP 1231



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 222  ASRSPTRKVLSIGWDMDTTGRRL 290
            A+ SP+R+V+  G+D+ T  + L
Sbjct: 1985 AAVSPSRRVVDAGYDVPTLSKYL 2007


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 274 VSISQPIESTFLVGDRLASQPVREALQYSLPF 179
           VS++ P   T LV  RL ++PV +A     PF
Sbjct: 502 VSVATP-NDTSLVRGRLVAKPVADARDAPAPF 532


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 637 PANYGIKTXPNRXYLVKAXKKHCXTEPPGFVVYKNDTTISF-XXSNQSR 494
           P N G+K        +K   +H    P    ++ + T+++F   S QSR
Sbjct: 164 PGNNGLKDQILALKFIKKYIQHFGGTPDSITLFGDGTSVNFHYLSPQSR 212


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 637 PANYGIKTXPNRXYLVKAXKKHCXTEPPGFVVYKNDTTISF-XXSNQSR 494
           P N G+K        +K   +H    P    ++ + T+++F   S QSR
Sbjct: 164 PGNNGLKDQILALKFIKKYIQHFGGTPDSITLFGDGTSVNFHYLSPQSR 212


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 637 PANYGIKTXPNRXYLVKAXKKHCXTEPPGFVVYKNDTTISF-XXSNQSR 494
           P N G+K        +K   +H    P    ++ + T+++F   S QSR
Sbjct: 164 PGNNGLKDQILALKFIKKYIQHFGGTPDSITLFGDGTSVNFHYLSPQSR 212


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 637 PANYGIKTXPNRXYLVKAXKKHCXTEPPGFVVYKNDTTISF-XXSNQSR 494
           P N G+K        +K   +H    P    ++ + T+++F   S QSR
Sbjct: 164 PGNNGLKDQILALKFIKKYIQHFGGTPDSITLFGDGTSVNFHYLSPQSR 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,194
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)