Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0415
         (371 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   3.5  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   6.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   8.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   8.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   8.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   8.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   8.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.2  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 22  MSQCKPY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLT 156
           M  C P   DT    +Y+F   R Y +   T VI  +   + TLT
Sbjct: 230 MYACCP--NDTYPMIVYEFSISRHYGILHATYVIPAVTMMLLTLT 272


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 234 NLDNFCRRMVKYRRRIFQMS 293
           N D FC++M K  + I  +S
Sbjct: 5   NQDTFCKKMRKATKEIHSIS 24


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/36 (25%), Positives = 22/36 (61%)
 Frame = -1

Query: 236 IHQN*RLRTRGPPSIGFDLIKALIPSLVRVLIACIS 129
           I+Q   L  +   +IG+ + +  +PS++ V+++ +S
Sbjct: 227 IYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 262


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 28  QCKPY*GDTANGSIYQFWFLRSY 96
           +C  Y  D +   +YQ++ LR Y
Sbjct: 140 RCLHYTVDKSKPKVYQWFDLRKY 162


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 28  QCKPY*GDTANGSIYQFWFLRSY 96
           +C  Y  D +   +YQ++ LR Y
Sbjct: 145 RCLHYTVDKSKPKVYQWFDLRKY 167


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 42  LRRYREWLNISVLVP*ILLSYL 107
           LRR   +  ++++VP + +SYL
Sbjct: 231 LRRKTLFYTVNLIVPCVSISYL 252


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 371 PESNPDSPLP 342
           P SNP SP+P
Sbjct: 438 PSSNPVSPVP 447


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 28  QCKPY*GDTANGSIYQFWFLRSY 96
           +C  Y  D +   +YQ++ LR Y
Sbjct: 145 RCLHYTVDKSKPKVYQWFDLRKY 167


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 117 GNSRANTCN 143
           GNSRANT N
Sbjct: 131 GNSRANTYN 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,416
Number of Sequences: 438
Number of extensions: 1896
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)