Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0414
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   8.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 57  YLLFTIYKQVILVVDY 10
           +LLFT+Y   +L++DY
Sbjct: 282 FLLFTLYSS-LLLLDY 296


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 57  YLLFTIYKQVILVVDY 10
           +LLFT+Y   +L++DY
Sbjct: 208 FLLFTLYSS-LLLLDY 222


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 206 IQSSRTVYIFGIELIMKNCK 265
           ++  + +  F I  IMK+CK
Sbjct: 295 VKKPKKITDFSISAIMKDCK 314


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 152 GPL*TSQPSFEIARPDT 102
           GP   +QP  E A+P+T
Sbjct: 337 GPKIKTQPKAEEAKPET 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,245
Number of Sequences: 336
Number of extensions: 1703
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)