Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0414
         (356 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0925 - 7306881-7308486,7308797-7308906                           31   0.35 
10_08_0482 + 18218163-18218362,18220388-18220446,18223027-182230...    27   5.7  
09_02_0237 + 6141048-6141962                                           27   5.7  
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560...    27   5.7  
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232...    26   7.6  
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567     26   7.6  

>01_01_0925 - 7306881-7308486,7308797-7308906
          Length = 571

 Score = 30.7 bits (66), Expect = 0.35
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 300 CILTGAADGTVKQW 341
           CI TG+ADGTVK W
Sbjct: 315 CIFTGSADGTVKMW 328


>10_08_0482 +
           18218163-18218362,18220388-18220446,18223027-18223083,
           18223245-18223279,18223617-18223720,18223870-18223945,
           18224045-18224103,18224183-18224248,18224338-18224421,
           18224503-18224567,18224658-18224740,18224832-18224903,
           18225166-18225306,18225395-18225456,18225539-18225605,
           18225863-18226075
          Length = 480

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 91  NWFQVSGLAISKDGWLVYSGPG 156
           NW  ++  A   D W  Y+GPG
Sbjct: 244 NWGSMTSRADENDQWAAYAGPG 265


>09_02_0237 + 6141048-6141962
          Length = 304

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = +3

Query: 90  ELVSSIWPS-NFERWLARL*RA---GKKSLYC 173
           EL   I P  NFERW A L RA   G + +YC
Sbjct: 182 ELCQPILPEDNFERWCAALCRAMVLGGRHVYC 213


>04_04_0990 -
           29955207-29955551,29955639-29955813,29955887-29956017,
           29956317-29956436,29956908-29956984,29957070-29957316,
           29957413-29957569,29958191-29958309,29958421-29958555,
           29958636-29958921,29959009-29959211,29959732-29959881,
           29960084-29960266,29960931-29961278
          Length = 891

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 288 PEKRCILTGAADGTVKQWLITN 353
           P ++C++T + D TVK W + +
Sbjct: 559 PVEQCVITSSGDRTVKIWAVAD 580


>06_01_0320 -
           2320317-2320336,2320791-2320902,2321092-2321236,
           2321353-2321459,2321572-2321665,2321752-2321948,
           2322311-2322382,2322504-2322618,2323060-2323176,
           2323253-2323344,2323445-2323621,2323746-2323820,
           2323911-2324051,2324671-2324859,2325298-2325363,
           2325445-2325595,2325718-2325786,2326293-2326441,
           2326526-2326657,2326756-2327081,2327167-2327203,
           2327926-2327980,2328242-2328309,2328464-2328466
          Length = 902

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 288 PEKRCILTGAADGTVKQW 341
           PE   I+TG+ DGTV+ W
Sbjct: 234 PELPIIITGSEDGTVRIW 251


>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
          Length = 602

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -3

Query: 327 FHQQHLLGYISSLAILVIGQHLQFFIMSSIPKMYTVRLL*INDTVIVFEGFYNTKTFSRP 148
           F +Q LL  +     L  G+  +    S+IP+MY      + D  ++  G      ++  
Sbjct: 409 FGRQALLSPVLYSPYLRRGKRFRVLNPSNIPRMYHSTSALLPDATVLVAGSNTNSAYNFS 468

Query: 147 AIDEPTIFR 121
            +D PT  R
Sbjct: 469 GVDFPTEVR 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,153,775
Number of Sequences: 37544
Number of extensions: 168756
Number of successful extensions: 414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)