Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0414
         (356 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   0.37 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   0.48 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   4.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 124  KDG-WLVYSGPGKSLCIVEPLKNYNSVIDSKQPYC 225
            K+G W + SG G   C  +P+ +YN+  D+    C
Sbjct: 924  KNGYWNIVSGNGCESCNCDPIGSYNASCDTYSGDC 958


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 303 YISSLAILVIGQHLQFFIMSSIPKMYTV 220
           YI+     VIG  +  FI+ S P+M TV
Sbjct: 143 YITIFVTAVIGNSIVLFIVQSNPRMRTV 170


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 214  QPYCVHFWNRAHNEKL*VLTYHQNGQRRDVS 306
            Q +  H WNR H E L  L       +  +S
Sbjct: 1634 QKHMQHIWNRWHREYLSTLQKRAKWNKNAIS 1664


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,438
Number of Sequences: 2352
Number of extensions: 7248
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)