Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0414
(356 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68527-1|CAA48540.1| 146|Homo sapiens TCR Vbeta 5.5 protein. 34 0.15
AJ437355-1|CAD24850.1| 96|Homo sapiens T-cell receptor beta ch... 31 1.0
AY751929-1|AAV31732.1| 50|Homo sapiens T cell receptor beta pr... 31 1.4
U79183-1|AAB39347.1| 65|Homo sapiens T cell receptor beta chai... 29 3.2
AJ507142-1|CAD45171.1| 93|Homo sapiens T-cell receptor beta ch... 29 3.2
BC029520-1|AAH29520.1| 384|Homo sapiens WDSUB1 protein protein. 29 5.6
AK093494-1|BAC04184.1| 476|Homo sapiens protein ( Homo sapiens ... 29 5.6
X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homolo... 28 7.4
BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae hom... 28 7.4
AY751918-1|AAV32424.1| 50|Homo sapiens T cell receptor beta pr... 28 7.4
AY751853-1|AAV32389.1| 50|Homo sapiens T cell receptor beta pr... 28 7.4
>X68527-1|CAA48540.1| 146|Homo sapiens TCR Vbeta 5.5 protein.
Length = 146
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 55 IEMDESVLFPSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
+E+D+S L+ + F+ GL + G+ Y GPG L + E LKN
Sbjct: 100 LELDDSALYLCASSFK--GLGLPSRGYEQYFGPGTRLTVTEDLKN 142
>AJ437355-1|CAD24850.1| 96|Homo sapiens T-cell receptor beta chain
protein.
Length = 96
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 82 PSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
PSPN + A S G+ Y GPG L + E LKN
Sbjct: 23 PSPNQTSLYFCASSWGGYEQYFGPGTRLTVTEDLKN 58
>AY751929-1|AAV31732.1| 50|Homo sapiens T cell receptor beta
protein.
Length = 50
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 82 PSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
PSPN + A S++G+ Y GPG L + E LKN
Sbjct: 16 PSPNQTSLYFCA-SREGYEQYFGPGTRLTVTEDLKN 50
>U79183-1|AAB39347.1| 65|Homo sapiens T cell receptor beta chain
protein.
Length = 65
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 76 LFPSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
L S + F + ++S G+ Y GPG L + E LKN
Sbjct: 16 LLLSDSGFYLCAWSVSPSGYEQYFGPGTRLTVTEDLKN 53
>AJ507142-1|CAD45171.1| 93|Homo sapiens T-cell receptor beta chain
V14-C protein.
Length = 93
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 82 PSPN----WFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
PSPN +F S L DG Y GPG L ++E LKN
Sbjct: 18 PSPNQTSLYFCASSLGPGSDG-TQYFGPGTRLTVLEDLKN 56
>BC029520-1|AAH29520.1| 384|Homo sapiens WDSUB1 protein protein.
Length = 384
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 288 PEKRCILTGAADGTVKQW 341
P+ C+ +GAADGTV W
Sbjct: 107 PDSTCLASGAADGTVVLW 124
>AK093494-1|BAC04184.1| 476|Homo sapiens protein ( Homo sapiens
cDNA FLJ36175 fis, clone TESTI2026453, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 476
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 288 PEKRCILTGAADGTVKQW 341
P+ C+ +GAADGTV W
Sbjct: 107 PDSTCLASGAADGTVVLW 124
>X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homologue
protein.
Length = 1015
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 273 LSPEWPEKRCILTGAADGTVKQW 341
L+P P++ +LTG DGTV+ W
Sbjct: 428 LTPAPPQRDLLLTGHEDGTVRFW 450
>BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae
homolog 2 (Drosophila) protein.
Length = 1020
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 273 LSPEWPEKRCILTGAADGTVKQW 341
L+P P++ +LTG DGTV+ W
Sbjct: 428 LTPAPPQRDLLLTGHEDGTVRFW 450
>AY751918-1|AAV32424.1| 50|Homo sapiens T cell receptor beta
protein.
Length = 50
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 82 PSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
PSPN + A ++ + Y GPG L + E LKN
Sbjct: 15 PSPNQTSLYFCASNEGPYEQYFGPGTRLTVTEDLKN 50
>AY751853-1|AAV32389.1| 50|Homo sapiens T cell receptor beta
protein.
Length = 50
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 82 PSPNWFQVSGLAISKDGWLVYSGPGKSLCIVEPLKN 189
PSPN + A ++ + Y GPG L + E LKN
Sbjct: 15 PSPNQTSLYFCASNEGPYEQYFGPGTRLTVTEDLKN 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,272,924
Number of Sequences: 237096
Number of extensions: 1016602
Number of successful extensions: 6414
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6414
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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