Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0413
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.016
U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical p... 30 0.61
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 30 0.61
AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical ... 30 0.61
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 1.9
Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical pr... 28 2.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 2.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 2.4
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 3.2
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 27 4.3
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 27 4.3
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 27 4.3
AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical ... 27 4.3
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 27 5.7
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 27 5.7
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 27 5.7
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 27 5.7
L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protei... 27 5.7
L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protei... 27 5.7
L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protei... 27 5.7
AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm rece... 27 5.7
Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical p... 26 7.5
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 26 7.5
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 26 7.5
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 26 7.5
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 26 7.5
U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 26 7.5
U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kina... 26 7.5
U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kina... 26 7.5
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 26 7.5
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 26 7.5
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 26 7.5
AB016838-1|BAA77824.4| 432|Caenorhabditis elegans Ca2+/calmodul... 26 7.5
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical pr... 26 9.9
U80029-12|AAB37591.1| 456|Caenorhabditis elegans Hypothetical p... 26 9.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 9.9
AL117193-19|CAB54988.1| 108|Caenorhabditis elegans Hypothetical... 26 9.9
AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode ast... 26 9.9
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 48.0 bits (109), Expect = 2e-06
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +3
Query: 84 RNALLSSIRQGAKLKKTVTVDKSGPYI------PGKVNNVPSGTVAGNGVQAPPPMQNGG 245
RNALL I +G KLKKTVT D+S P + G +N SG GNG A PP +GG
Sbjct: 29 RNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGSSGSSSNGNSGN--GNGPAAKPPQMSGG 86
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Frame = +2
Query: 251 TSGLGGLFAGGMP------KLRPTGKXAGSTPNGQVRTDVPRXXP 367
+ GLGGLFA GMP K+R G P VP P
Sbjct: 84 SGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAPPVPPPAP 128
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 48.0 bits (109), Expect = 2e-06
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +3
Query: 84 RNALLSSIRQGAKLKKTVTVDKSGPYI------PGKVNNVPSGTVAGNGVQAPPPMQNGG 245
RNALL I +G KLKKTVT D+S P + G +N SG GNG A PP +GG
Sbjct: 29 RNALLGDIHKGLKLKKTVTNDRSAPSVGKVVGSSGSSSNGNSGN--GNGPAAKPPQMSGG 86
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Frame = +2
Query: 251 TSGLGGLFAGGMP------KLRPTGKXAGSTPNGQVRTDVPRXXP 367
+ GLGGLFA GMP K+R G P VP P
Sbjct: 84 SGGLGGLFANGMPMKPSENKIRRATTSIGPPPTASSAPPVPPPAP 128
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.016
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYI 164
K G DR L I+ G KLKKT T DKSG ++
Sbjct: 146 KNPGTVDRGEFLKGIQGGFKLKKTTTNDKSGLFV 179
>U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical
protein C45G9.10b protein.
Length = 805
Score = 29.9 bits (64), Expect = 0.61
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -1
Query: 354 GTSVLTWPFGVEPANFPVGRSFGIPPANNPPSPEVHHLHSALAEEPALRFQPRFR*VHYS 175
G+ P P PV S+ PP NPPSP + +L L +E R F+
Sbjct: 619 GSRTFERPQTTSPTYIPVTTSY--PPTTNPPSPALPNLIDFLNKE---RENVNFKYDSTE 673
Query: 174 LSLVC 160
L+++C
Sbjct: 674 LAMIC 678
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical
protein C45G9.10a protein.
Length = 971
Score = 29.9 bits (64), Expect = 0.61
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -1
Query: 354 GTSVLTWPFGVEPANFPVGRSFGIPPANNPPSPEVHHLHSALAEEPALRFQPRFR*VHYS 175
G+ P P PV S+ PP NPPSP + +L L +E R F+
Sbjct: 785 GSRTFERPQTTSPTYIPVTTSY--PPTTNPPSPALPNLIDFLNKE---RENVNFKYDSTE 839
Query: 174 LSLVC 160
L+++C
Sbjct: 840 LAMIC 844
>AF016682-4|AAB66185.1| 263|Caenorhabditis elegans Hypothetical
protein T07D3.5 protein.
Length = 263
Score = 29.9 bits (64), Expect = 0.61
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = -3
Query: 268 STEPRGAPPPFCIGGGACT---PFPATVPLGTLF-TFPGMYGPLLSTVTVFFNLAPCLIE 101
S PR PPP IGGG P+P + FP + G + + V F +I
Sbjct: 183 SPPPRHFPPPVIIGGGEVVIGKPYPGDASTPPPYPKFPPVVGRNI-PLPVNFPRGEVVIG 241
Query: 100 LRSAFLSSAPPPFLDPP 50
S +S PPP+ + P
Sbjct: 242 KGSLGEASTPPPYSEFP 258
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 298 P*LWHSPSKQSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYG 155
P +H+PS QS G PPP G P P + P G P +G
Sbjct: 353 PQQFHAPSPQSFG--GPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFG 398
>Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical
protein F13A7.1 protein.
Length = 340
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 51 GGSKKGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAP 224
GG+ GGA A S QGA V+ + P + P G G Q P
Sbjct: 155 GGAAGAGGASQMTAAQGSAAQGAGGGGAVSQISAAPGSMAQGVGAPGSAAQGGGAQGP 212
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 57 SKKGGGADDRNALLSSIRQGAKLK 128
S K G D R +++ IRQGA+LK
Sbjct: 699 SPKSAGGDARGDVMAQIRQGAQLK 722
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 57 SKKGGGADDRNALLSSIRQGAKLK 128
S K G D R +++ IRQGA+LK
Sbjct: 525 SPKSAGGDARGDVMAQIRQGAQLK 548
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 183 VPSGTVAGNG-VQAPPPMQNGGGAPLGSV 266
VP+ + G G PPP Q GGG G +
Sbjct: 260 VPTNPMGGGGGYPQPPPQQGGGGGGAGGM 288
>Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical
protein E04D5.1a protein.
Length = 570
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 174 VNNVPSGTVAGNGVQAPPPMQN--GGGAPLG 260
+NNVP+G V G PP ++ GGG G
Sbjct: 452 LNNVPAGAVRQAGAYIPPHLRKPLGGGGSAG 482
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 153 GPYIP--GKVNNVPSGTVAGNGVQAPPPMQNGGG 248
GP P G +N P G NG+Q PP M G
Sbjct: 170 GPQGPKGGNGDNGPDGKAGANGMQGPPGMMGPPG 203
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 150 SGPY-IPGKVNNV--PSGTVAGNGVQAPPPMQNGGGAPLGS 263
SGP PG++N + P+G GV+ PP + G G+
Sbjct: 208 SGPKGAPGRINQINGPAGPAGHKGVRGPPGPRGEAGLDGGN 248
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 51 GGSKKGGGADDRNALLS-SIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPP 227
GG++ RN+L++ +++ ++ K + PS V GN P
Sbjct: 343 GGAQAYPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGP 402
Query: 228 PMQNGGGAPLGSVD 269
NGGGA G D
Sbjct: 403 GGNNGGGAGNGGFD 416
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 51 GGSKKGGGADDRNALLS-SIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPP 227
GG++ RN+L++ +++ ++ K + PS V GN P
Sbjct: 356 GGAQAYPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGP 415
Query: 228 PMQNGGGAPLGSVD 269
NGGGA G D
Sbjct: 416 GGNNGGGAGNGGFD 429
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 51 GGSKKGGGADDRNALLS-SIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPP 227
GG++ RN+L++ +++ ++ K + PS V GN P
Sbjct: 343 GGAQAYPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGP 402
Query: 228 PMQNGGGAPLGSVD 269
NGGGA G D
Sbjct: 403 GGNNGGGAGNGGFD 416
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 27.1 bits (57), Expect = 4.3
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 51 GGSKKGGGADDRNALLS-SIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPP 227
GG++ RN+L++ +++ ++ K + PS V GN P
Sbjct: 356 GGAQAYPALSQRNSLVNPNLQPNHPTAPPQSLRKPDDFSDLSFPEPPSSFVGGNNKPGGP 415
Query: 228 PMQNGGGAPLGSVD 269
NGGGA G D
Sbjct: 416 GGNNGGGAGNGGFD 429
>AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical
protein Y41D4A.5 protein.
Length = 456
Score = 27.1 bits (57), Expect = 4.3
Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = -3
Query: 280 PSKQSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTV----TVFFNLAP 113
P Q +P+ PPP P VP G L F +TV V F P
Sbjct: 16 PEIQEQKPKSPPPPLPTSNPVVKDTPNVVPTGDLIQFESEEERAATTVPNGNPVIFEKNP 75
Query: 112 CLIELRSAFL 83
+ L FL
Sbjct: 76 AMDGLLREFL 85
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 186 PSGTVAGNGVQAPPPMQNGGGAPLGSVD 269
PS V GN P NGGGA G D
Sbjct: 98 PSSFVGGNNKPGGPGGNNGGGAGNGGFD 125
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 208 FPATVPLGTLFTFPGMYGPLLSTVTVFFNLAPCLIELRSAFLSSAPPPFLDPPNT 44
F ++ P FTFP P S+ T+F + P S +S+ P NT
Sbjct: 4 FGSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNT 58
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 208 FPATVPLGTLFTFPGMYGPLLSTVTVFFNLAPCLIELRSAFLSSAPPPFLDPPNT 44
F ++ P FTFP P S+ T+F + P S +S+ P NT
Sbjct: 4 FGSSTPQKQAFTFPTPNAPTTSSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNT 58
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 129 KTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPPPMQNGGGAPLGSVDCLLGECQSYGLQG 308
++VT+D + + G NV G P P +NGGG ++D + C+ G +G
Sbjct: 422 RSVTIDLTSVRVDG---NVTRGECTFQEKCLPNPCENGGGCVQSALDDYVCNCKE-GYKG 477
>L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protein
1.1, isoform b protein.
Length = 438
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPPPM 233
K G ++ R KL + + +K P NN S + + NG APPP+
Sbjct: 336 KERGVEEERRKRERDRMAGKLDSSTSSEKRARIDP-LANNFVSSSSSSNGKLAPPPI 391
>L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protein
1.1, isoform c protein.
Length = 183
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPPPM 233
K G ++ R KL + + +K P NN S + + NG APPP+
Sbjct: 51 KERGVEEERRKRERDRMAGKLDSSTSSEKRARIDP-LANNFVSSSSSSNGKLAPPPI 106
>L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protein
1.1, isoform a protein.
Length = 468
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTVTVDKSGPYIPGKVNNVPSGTVAGNGVQAPPPM 233
K G ++ R KL + + +K P NN S + + NG APPP+
Sbjct: 336 KERGVEEERRKRERDRMAGKLDSSTSSEKRARIDP-LANNFVSSSSSSNGKLAPPPI 391
>AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm
receptor protein 256 protein.
Length = 353
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 208 FPATVPLGTLFTFPGMYGPLLSTVTVFFNLAPC 110
+PA P+ TLF ++ FFN+A C
Sbjct: 297 YPALNPIPTLFVVKNYRKAIIDAFCYFFNIAGC 329
>Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 235 CIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFFNL 119
C+G + FP V LG TFP M + +F +L
Sbjct: 370 CLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSL 408
>Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 235 CIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFFNL 119
C+G + FP V LG TFP M + +F +L
Sbjct: 370 CLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSL 408
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 282 PPANNPPSPEVHHLHSALAEEP 217
PP PP+P V+H + +A+ P
Sbjct: 355 PPPPTPPNPPVNHAIAPVAQHP 376
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform c protein.
Length = 1576
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 271 QSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFF 125
QS G P + G C P P T P G L FP P S + FF
Sbjct: 670 QSLTAGGFTPSTPMTPGFCLPTPITTPTG-LPPFPFPANPKQSVKSKFF 717
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform b protein.
Length = 1610
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 271 QSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFF 125
QS G P + G C P P T P G L FP P S + FF
Sbjct: 670 QSLTAGGFTPSTPMTPGFCLPTPITTPTG-LPPFPFPANPKQSVKSKFF 717
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like
protein protein 4,isoform a protein.
Length = 1595
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 271 QSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFF 125
QS G P + G C P P T P G L FP P S + FF
Sbjct: 670 QSLTAGGFTPSTPMTPGFCLPTPITTPTG-LPPFPFPANPKQSVKSKFF 717
>U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical
protein C06A8.5 protein.
Length = 479
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 294 SFGIPPANNPPSPEVHHLHSALA---EEPALRFQPR 196
SF I P N P P++ H S++A ++PA +F R
Sbjct: 386 SFFIKPKNVEPMPQLGHSLSSIAVTPQKPAAKFTTR 421
>U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kinase
protein 1, isoforma protein.
Length = 432
Score = 26.2 bits (55), Expect = 7.5
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 285 IPPANNPPSPEVHHLHSALAEEPALR 208
+PP N+PP+ ++L+S + P ++
Sbjct: 381 VPPPNSPPATSNNNLNSTKVDRPEIK 406
>U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kinase
protein 1, isoformb protein.
Length = 512
Score = 26.2 bits (55), Expect = 7.5
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 285 IPPANNPPSPEVHHLHSALAEEPALR 208
+PP N+PP+ ++L+S + P ++
Sbjct: 461 VPPPNSPPATSNNNLNSTKVDRPEIK 486
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 26.2 bits (55), Expect = 7.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 286 HSPSKQSTEPRGAPPPFCIGG 224
HSP++ ST+ R +PP F G
Sbjct: 1056 HSPARLSTQERQSPPSFVNNG 1076
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 259 PRGAP--PPFCIGGGACTPFPATVPLG 185
PRG P PP GGG PFP +P G
Sbjct: 23 PRGPPQQPPQPQGGGVAVPFP--IPQG 47
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 271 QSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTVFF 125
QS G P + G C P P T P G L FP P S + FF
Sbjct: 90 QSLTAGGFTPSTPMTPGFCLPTPITTPTG-LPPFPFPANPKQSVKSKFF 137
>AB016838-1|BAA77824.4| 432|Caenorhabditis elegans
Ca2+/calmodulin-dependent proteinkinase kinase protein.
Length = 432
Score = 26.2 bits (55), Expect = 7.5
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -1
Query: 285 IPPANNPPSPEVHHLHSALAEEPALR 208
+PP N+PP+ ++L+S + P ++
Sbjct: 381 VPPPNSPPATSNNNLNSTKVDRPEIK 406
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTV 137
KGGG+D L ++ +GA+L K++
Sbjct: 762 KGGGSDSMKLNLENLTEGAELCKSI 786
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 63 KGGGADDRNALLSSIRQGAKLKKTV 137
KGGG+D L ++ +GA+L K++
Sbjct: 762 KGGGSDSMKLNLENLTEGAELCKSI 786
>Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical
protein ZK550.2 protein.
Length = 502
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 226 GGACTPFPATVPLGTLFTFPG-MYGPLLSTVTVF 128
GG+ TPF A++ + LF G Y +L + T+F
Sbjct: 433 GGSITPFVASIIITFLFQHSGYKYVIILQSTTIF 466
>U80029-12|AAB37591.1| 456|Caenorhabditis elegans Hypothetical
protein T20D4.6 protein.
Length = 456
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 253 GAPPPFCIGGGACTPFPATVPLGTLFTFPGMYGPLLSTVTV 131
G P G PF T+PL +F G YG L TV V
Sbjct: 94 GEGPKELNAGEYAWPFSYTLPLNIPPSFEGKYGYLRYTVKV 134
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -1
Query: 333 PFGVEPANFPVG--RSFGIPPANNPPSP 256
P G +P+ P G G PP+ PP P
Sbjct: 307 PSGAQPSGGPPGPFNPSGAPPSGGPPGP 334
>AL117193-19|CAB54988.1| 108|Caenorhabditis elegans Hypothetical
protein Y105C5A.9a protein.
Length = 108
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 165 PGKVNNVPSGTVAGNGVQAPPPMQNGGGAPLGSVD 269
PG V N +G +AG PP N G P G+ D
Sbjct: 6 PGTVGNDMAGALAGRHDDEPPISSNYQGRP-GNAD 39
>AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode
astacin protease protein30 protein.
Length = 710
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 263 RAQRCTTSILHWRRSLHSVSSHGSARYIIH 174
R+QR T I HWR L + + S RY+++
Sbjct: 632 RSQRSETRIGHWRVLLVLLRNMVSQRYLVY 661
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,225,499
Number of Sequences: 27780
Number of extensions: 233639
Number of successful extensions: 972
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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