Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0413
(372 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g27410.1 68418.m03272 aminotransferase class IV family protei... 31 0.18
At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical... 29 0.75
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 29 0.75
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 1.3
At5g57360.1 68418.m07166 F-box family protein / LOV kelch protei... 28 2.3
At1g63600.1 68414.m07189 protein kinase-related low similarity t... 28 2.3
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 27 3.0
At1g24370.1 68414.m03073 hypothetical protein contains Pfam prof... 27 3.0
At5g14890.1 68418.m01746 NHL repeat-containing protein contains ... 27 4.0
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 27 4.0
At3g14760.1 68416.m01866 expressed protein 27 4.0
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 27 5.3
At4g30680.1 68417.m04349 MA3 domain-containing protein similar t... 27 5.3
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 27 5.3
At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 26 7.0
At5g10860.1 68418.m01261 CBS domain-containing protein contains ... 26 7.0
At3g32940.1 68416.m04174 expressed protein 26 7.0
At2g32310.1 68415.m03950 expressed protein 26 7.0
At3g63500.2 68416.m07153 expressed protein 23 7.2
At5g51750.1 68418.m06417 subtilase family protein similar to sub... 26 9.2
At5g45540.1 68418.m05593 expressed protein contains Pfam domain,... 26 9.2
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 26 9.2
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 26 9.2
>At5g27410.1 68418.m03272 aminotransferase class IV family protein
contains Pfam profile: PF01063 aminotransferase class IV
Length = 559
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 175 TFPGMYGPLLSTVTVFFNLAPCLIELRSAFLSSA-PPPFLDPP 50
TFP M+ LL +N+ C ++ +S+ LSS PPP L P
Sbjct: 212 TFPLMHYDLLEQCLPLYNILRCHMKHKSSLLSSTLPPPSLPVP 254
>At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical to
G-box binding factor 2 (GBF2) SP:P42775 from
[Arabidopsis thaliana];contains Pfam profile: PF00170
bZIP transcription factor
Length = 360
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 298 P*LWHSPSKQSTEPRGAP-PPFCIGGG 221
P +W SPS P GAP PPFC GG
Sbjct: 63 PYMWASPSPMMA-PYGAPYPPFCPPGG 88
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 283 SPSKQSTEPRGAPPPFCIGGGACTPFPATVPLGTLFT-FPGMYGP 152
SPS + P PP TPFP T GT F P ++GP
Sbjct: 109 SPSSTRSPPSTTPPTGTTPTNGTTPFPGTPFPGTPFPGTPPVFGP 153
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 325 C*TCXFPCRP*LWHSPSKQSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFP 167
C +C PC+P +PS +PPP AC P P++ G + +P
Sbjct: 34 CTSCDNPCQP----NPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYYYYP 82
>At5g57360.1 68418.m07166 F-box family protein / LOV kelch protein 1
(LKP1) E3 ubiquitin ligase SCF complex F-box subunit;
identical to clock-associated PAS protein ZTL; ZEITLUPE
GI:7839456, LOV kelch protein 1 GI:11610573, Adagio 1
GI:13487068 from [Arabidopsis thaliana]; contains Pfam
profile PF01344: Kelch motif; identical to cDNA Adagio 1
(ADO1) GI:13487067; identical to cDNA LKP1 mRNA for LOV
kelch protein 1, GI:11610572
Length = 609
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 203 WKRSAGSSANAEWRWCTSGLGGLFAGGMPKLRPTGKXAGSTPNGQVRTD 349
W + SA+ GGLF GG P P G + P G V TD
Sbjct: 3 WDSGSDLSADDASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTD 51
>At1g63600.1 68414.m07189 protein kinase-related low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 302
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 112 CLIELRSAFLSSAPPPFLDPP 50
CL+ + LSS PPP+ PP
Sbjct: 244 CLLRYEATALSSPPPPYPSPP 264
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 165 PGKVNNVPSGTVAGNGVQAPPPMQNGGGAPLGS 263
P + VP GN Q PPP+Q G GA L +
Sbjct: 504 PEHMRQVPEAF--GNNFQRPPPLQPGQGAYLAA 534
>At1g24370.1 68414.m03073 hypothetical protein contains Pfam
profiles PF04776: Protein of unknown function (DUF626),
PF04827: Protein of unknown function (DUF635)
Length = 413
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 194 NRGWKRSAGSSANAEWRW--CTSGLGGLFAG 280
+RG+ R GS W+W C + GG +AG
Sbjct: 65 SRGFPRMLGSLDCMHWKWKNCPTAWGGQYAG 95
>At5g14890.1 68418.m01746 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 754
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 321 EPANFPVGRSFGIPPANNPPSPE 253
EP +PV SF IP + PP+ E
Sbjct: 361 EPNQWPVQESFAIPEEDGPPALE 383
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Frame = +3
Query: 129 KTVTVDKSGPYIP---------GKVNNVPSGT--VAGNGVQAPPPMQNGGGAP 254
K V ++K P +P GK N+PS + G G PPP GG P
Sbjct: 640 KLVDIEKRPPRVPRPPPRSAGGGKSTNLPSARPPLPGGGPPPPPPPPGGGPPP 692
>At3g14760.1 68416.m01866 expressed protein
Length = 168
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 112 RALS*KRP*QWTKVDHTYQGK*IMYLAEPWLETECR 219
R + KR +W+KV T G A W+E E R
Sbjct: 62 RTMEEKRKCKWSKVKRTLMGSFCWSSAAKWMEMETR 97
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 283 SPSKQSTEPRGAPPPFCIGGGACTPFPATVP 191
+P+ +T P PPP TP PA P
Sbjct: 25 APTPTATPPPATPPPVATPPPVATPPPAATP 55
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 283 SPSKQSTEPRGAPPPFCIGGGACTPFPATVP 191
+P + P PPP A TP PAT P
Sbjct: 31 TPPPATPPPVATPPPVATPPPAATPAPATPP 61
>At4g30680.1 68417.m04349 MA3 domain-containing protein similar to
SP|Q03387 Eukaryotic initiation factor (iso)4F subunit
P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum};
contains Pfam profile PF02847: MA3 domain
Length = 263
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 168 GKVNNVPSGTVAGNGVQAPPPM 233
G +N+ PS V GNG Q P P+
Sbjct: 50 GLLNDRPSALVQGNGSQQPKPV 71
>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
(LTA2) identical to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963
Length = 480
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 283 SPSKQSTEPRGAPPPFCIGGGACTPFPATVPLGTLFTFPGM 161
+PSK S P PPP T P +P ++ F M
Sbjct: 227 APSKSSIAPPPPPPPPVTAKATTTNLPPLLPDSSIVPFTAM 267
>At5g60070.1 68418.m07532 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 548
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 202 ATVPLGTLFTFPGMYGPLLSTVTVFFNLAPCLIELRSAF 86
ATV +FT PG Y LS++ +L I R AF
Sbjct: 378 ATVAFAAIFTVPGQYADELSSLLPGQSLGEANIADRPAF 416
>At5g10860.1 68418.m01261 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 206
Score = 26.2 bits (55), Expect = 7.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 209 RSAGSSANAEWRWCTS 256
+S G SA+ W WCT+
Sbjct: 62 KSKGKSADGSWLWCTT 77
>At3g32940.1 68416.m04174 expressed protein
Length = 607
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 318 PANFPVGRSFGIPPANNPPSPEVHHLHSALAEEPALR 208
P NFP G F A+ PP P HH + +P +R
Sbjct: 553 PRNFP-GAQFPQHSAHFPPRPVFHHDNLIPRGQPQIR 588
>At2g32310.1 68415.m03950 expressed protein
Length = 325
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 156 PYIPGKVNNVPSGTVAGNGVQAPPPMQNGGGAPLGSV 266
P+ +N++ + T A + PP G G P+GS+
Sbjct: 111 PFATESLNSLLASTEANQNLYTVPPHNFGYGEPIGSL 147
>At3g63500.2 68416.m07153 expressed protein
Length = 1162
Score = 23.4 bits (48), Expect(2) = 7.2
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +3
Query: 114 GAKLKKTV--TVDKSGPYIPGKVNNVPSGTVAGNGVQAPPPMQNGGGAPLGSVDCLLGEC 287
G++ K+V V KS + GK + S G P P G A DC L C
Sbjct: 175 GSEQSKSVGNVVKKSEEEVQGKSSTTSSEMEEGELEPEPQPETASGLAHQTKHDCKLPSC 234
Query: 288 QSYGLQGNXQVQHQMAKLGQ 347
S N ++ ++G+
Sbjct: 235 -SADDHKNARIDRSFQEIGK 253
Score = 21.0 bits (42), Expect(2) = 7.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 48 FGGSKKGGGADDRNALLSSIRQGAKLK 128
FGG G DDR+ L + LK
Sbjct: 109 FGGPGNDFGVDDRDRRLRDAERDRSLK 135
>At5g51750.1 68418.m06417 subtilase family protein similar to
subtilisin-like protease GI:3687307 from [Lycopersicon
esculentum]
Length = 780
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 208 FPATVPLGTLFTFPGM 161
FPATV +GT+ TF G+
Sbjct: 356 FPATVKIGTMRTFKGV 371
>At5g45540.1 68418.m05593 expressed protein contains Pfam domain,
PF04578: Protein of unknown function, DUF594; expression
supported by MPSS
Length = 803
Score = 25.8 bits (54), Expect = 9.2
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -2
Query: 236 LHWRRSLHSVSSHGSARYIIHFPWYVWSTFVHCYGL--F*LSALPNR 102
L W+RS S H +F + WS +VH Y L F L P R
Sbjct: 389 LRWKRSKCSQDGHQVLNR--NFMFRRWSEYVHAYNLIGFCLGIRPKR 433
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 309 FPVGRSFGIPPANNPPSPEVH 247
FP G SF + PAN P + H
Sbjct: 1470 FPFGNSFPVTPANFPGASTAH 1490
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 186 PSGTVAGNGVQAPPPMQNGGGAPLGS 263
P AG GV APPP G LG+
Sbjct: 264 PLPMAAGKGVAAPPPPPPGARGGLGA 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,827,834
Number of Sequences: 28952
Number of extensions: 218204
Number of successful extensions: 887
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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