Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0412
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.0  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 323 GKLDALIQFWVIFGYSCSDNKTREFFVLLYLIQFIN 430
           G LD+LI   V+        KT+E+  L    Q+I+
Sbjct: 81  GSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 383 YCHYMNIQKL 354
           YCHY+NI ++
Sbjct: 198 YCHYLNILRV 207


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 383 YCHYMNIQKL 354
           YCHY+NI ++
Sbjct: 198 YCHYLNILRV 207


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 187 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 41
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 187 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 41
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,994
Number of Sequences: 336
Number of extensions: 3442
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)