Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0412
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579077-1|AAT81601.1|  101|Anopheles gambiae neuropeptide F pro...    24   4.9  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.5  

>AY579077-1|AAT81601.1|  101|Anopheles gambiae neuropeptide F
           protein.
          Length = 101

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 104 RRCGKSSPSAFGC*STVNS*PALKFRLVGRIQHPASSALP 223
           +R G  +P+ FG     N      +RL+GRIQH     LP
Sbjct: 64  KRGGYLNPAIFGQDEQENL-----YRLIGRIQHFRDEQLP 98


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 226 CDEPYLDITFNITMRRKTLFY 246


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 226 CDEPYLDITFNITMRRKTLFY 246


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 222 CDEPYLDITFNITMRRKTLFY 242


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 143 STQRRKGCSSRSAGDNSEPNKMGRK 69
           S+    G  SRS  D  E + +GRK
Sbjct: 639 SSTTHSGAPSRSQSDEDEQHSVGRK 663


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,687
Number of Sequences: 2352
Number of extensions: 12423
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)