Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0412
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    27   0.12 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.0  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   2.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.5  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   6.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 180 GWLVAFSIQPHLLYLVWYPH 239
           G+L+A  +QP L++ +W PH
Sbjct: 162 GFLLAGIVQPFLIHWIWTPH 181


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 227 CDEPYLDITFNITMRRKTLFY 247


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 227 CDEPYLDITFNITMRRKTLFY 247


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 443 CNKIYL*IGLNITIQKTLVFY 381
           C++ YL I  NIT+++  +FY
Sbjct: 223 CDEPYLDITFNITMRRKTLFY 243


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 198 SIQPHLLYLVWY 233
           S+ P +LYL WY
Sbjct: 803 SVIPRILYLTWY 814


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 SIQPHLLYLVWYPHSVTLGR 257
           +I+P+  Y +W+P  +  G+
Sbjct: 138 NIEPYNNYYIWHPGKIVNGK 157


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +1

Query: 148  HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSH 249
            HG L          SH    L+C  +Y  +  SH
Sbjct: 1445 HGNLDELQLSRHATSHELKGLLCGNTYQLYLTSH 1478


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +1

Query: 148  HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSH 249
            HG L          SH    L+C  +Y  +  SH
Sbjct: 1441 HGNLDELQLSRHATSHELKGLLCGNTYQLYLTSH 1474


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 SIQPHLLYLVWYPHSVTLGR 257
           +I+P+  Y +W+P  +  G+
Sbjct: 138 NIEPYNNYYIWHPGKIVNGK 157


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 448 LNAIKSIYKLD*I*QYKKLSCF 383
           L+ +KS+Y+ +   Q KKL CF
Sbjct: 34  LSDLKSMYESNSEEQMKKLGCF 55


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 133 GGRAALPAAPEIIQNQTRWGERRSPLS 53
           GG    P    I+ ++  W ER  P+S
Sbjct: 58  GGVQVSPVQENIVIDKRPWWERYQPIS 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,821
Number of Sequences: 438
Number of extensions: 3755
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)