Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0411
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.67 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.3  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +3

Query: 57  RQPSNRIGVGSLYGLMVFCTS----KLEVCYIEANGFYLGKLRGL---LGDGN 194
           R+P NRI   +  G +V C++      ++ ++ ++G  +G + GL   L +GN
Sbjct: 27  REPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGN 79


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
 Frame = +3

Query: 279 AAVHRCKRPNTPITSCTMHPSPPPAN-RSSGEYRRXGPCHCSWTCRLSDKRVFTPSPAQT 455
           A+ +  +RP +   S   H   PP + + +  Y   GP + +W+       V TP+   +
Sbjct: 265 ASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYSTWS------TVQTPTTVMS 318

Query: 456 PLKICTKLVIWDEEXXLCPDRPXPCRTSERMRQ 554
           P   C  L            +P P ++  ++ Q
Sbjct: 319 PTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQ 351


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +3

Query: 258 VTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 350
           + RT+W  +       + PI  C  H   PP
Sbjct: 229 IVRTIWSKSKLLIPVGHIPIRQCDDHRDRPP 259


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 262 RVPSGPQLSTGASART 309
           R PSGP+LS  ++A T
Sbjct: 36  RYPSGPELSDRSAAYT 51


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 380 LRTLSLFMDMSPFRQACIHAVTG 448
           L  LS+ +D  P+R  CI    G
Sbjct: 322 LGNLSVCIDQQPWRSYCIQPPCG 344


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 297 KRPNTPITSCTMHPSPPP 350
           + P++P +  +  PSPPP
Sbjct: 216 EHPDSPNSKKSATPSPPP 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,764
Number of Sequences: 336
Number of extensions: 2902
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)