Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0411
(618 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 31 0.73
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 0.97
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 30 1.3
03_05_0868 + 28385066-28385478,28386050-28386167,28386365-283867... 30 1.7
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 30 1.7
01_06_1431 + 37317248-37317907 29 2.2
11_06_0610 - 25449085-25453284 29 3.0
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 3.0
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 3.9
09_01_0110 - 1714783-1714803,1718645-1719370 29 3.9
03_01_0225 + 1784211-1784324,1784398-1784668,1784992-1785248,178... 29 3.9
11_06_0690 + 26303733-26306540 28 5.2
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 5.2
02_01_0329 - 2263602-2264879 28 5.2
02_05_0827 - 32051086-32051445 28 6.8
02_03_0246 - 16807619-16808145,16808208-16808868 28 6.8
01_01_0138 + 1253256-1253534,1253625-1254359 28 6.8
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 27 9.0
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 9.0
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 27 9.0
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 9.0
05_07_0100 + 27679280-27680320 27 9.0
01_01_0917 + 7238721-7239078,7239590-7239957 27 9.0
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +1
Query: 289 TGASARTLPSPAARCIPPPRLRTGLXGNI---AAXDPVIVHGHV-AFQTS 426
T A PSP PPP G+ G + A P +V G+V +F TS
Sbjct: 285 TAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTS 334
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 276 PAAVHRCKRPNTPITSC-TMHPSPPPANRSSGEYR 377
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 277 PQLSTGASARTLPSPAARCIPPPRLRTG-LXGNIA 378
PQ + G+ A L + R PPPRLRT L G +A
Sbjct: 169 PQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>03_05_0868 +
28385066-28385478,28386050-28386167,28386365-28386726,
28389308-28389406,28389485-28389890
Length = 465
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 181 SETVTTSLTMTSGYLMERSALRKASR*RVPSGPQLS---TGASARTLPSPAARCIP 339
S + +LT+TS +L RS+L A R+P+GP LS A+ +PAA P
Sbjct: 3 SSSKLLALTLTSSFL--RSSLLPAPSRRLPTGPLLSLRFCSAAGDVADAPAAAAAP 56
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +3
Query: 168 LRGLLGDGNNEPYDDFRLPNGKICTSESESVTRTVWPAAVHRCKRPNTPITSCTMHPSPP 347
LR + GDG+NE +D++ +G+ + ++T+ + + + T T+ S P
Sbjct: 2437 LRTVRGDGDNECHDEWSDSDGEFPFARQLTITKKLLRRHTRKLRPRGQKNTGLTLQDSLP 2496
Query: 348 PANRSSGEYR 377
+ R + Y+
Sbjct: 2497 SSPRETTPYQ 2506
>01_06_1431 + 37317248-37317907
Length = 219
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 262 RVPSGPQLSTGASARTLPSPAARCIPPPRLRTGLXGNIAAXDPVI 396
R P P S+ +++ T SPAA PPRL + AA P I
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 268 PSGPQLSTGASARTLPSPAARCIPPPRLR 354
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 294 CKRPNTPITSCTMHPSPPPA 353
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -2
Query: 257 RLAFRSADLSIR*PEVIVRLVVTVSEKTAKFTQVEAVSFNVAHLKFRCA 111
R+ RS D+ + P V L V++S+ +FTQ+ ++ + L+F A
Sbjct: 760 RVTPRSLDILAKGPPVCGDLAVSLSQAGPQFTQIMRCNYAIKALRFSTA 808
>09_01_0110 - 1714783-1714803,1718645-1719370
Length = 248
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 243 SESESVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGE 371
+E +S + V P R K PN P T HP+PP +SS E
Sbjct: 2 AEKQSPSSGVKPPNPPRAKLPNPPGTK---HPNPPGTKQSSYE 41
>03_01_0225 +
1784211-1784324,1784398-1784668,1784992-1785248,
1785338-1785450,1791599-1791746,1791943-1792080,
1792448-1792525
Length = 372
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +3
Query: 213 FRLPNGKICTSESESVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRXGPC 392
F + T+ S S R PA C P++P P+PPP + G
Sbjct: 19 FAVATTSTSTTSSSSSWRIKRPARFRCCAEPSSPEQENPSTPAPPPVKPPASPSSLWGIS 78
Query: 393 HCSWT 407
+W+
Sbjct: 79 TSTWS 83
>11_06_0690 + 26303733-26306540
Length = 935
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 277 PQLSTGASARTLPSPAARCIPPPRLRTGLXGNIAAXDPVIVH 402
P L T + + S A PPP LR L G + P+IV+
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVY 748
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 429 HACLKGDMSMNNDRVLSGDIPXKTCSQAGGRDASCSW*WECSGA 298
H + D S DR++S I +A GRD W E SGA
Sbjct: 288 HCNVYSDKSNEADRLVSAKISSHENKEASGRDIYDRWTSESSGA 331
>02_01_0329 - 2263602-2264879
Length = 425
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 252 ESVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYRRXGPCHCSW 404
+ VT + A V RCK+P + C P PPP + +Y+ C++
Sbjct: 188 DGVTERSFEALV-RCKKPE--LDDCLWRPMPPPPYVHAADYKHVVGDTCAY 235
>02_05_0827 - 32051086-32051445
Length = 119
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 313 PSPAARCIPPPRLRTGLXGNIAA 381
P+ AARC P PRL G G AA
Sbjct: 78 PAAAARCPPDPRLSAGFGGWPAA 100
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 408 MSMNNDRVLSGDIPXKTCSQAGGRDASCSW*WECSGACTCGQLRARRYALPTRFP 244
+SM+ R+ G +P + S R A+ W C C CG R RR A P+ P
Sbjct: 83 VSMSWPRMTRGRLPGLSRSCRSSRMAARCW--PCRPPCCCG--RRRRAASPSASP 133
>01_01_0138 + 1253256-1253534,1253625-1254359
Length = 337
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -1
Query: 450 VPVTA*IHACLKGDMSMNNDRVLSGDIPXKTCSQAGGRDASCSW*WECSGACTCGQLRAR 271
+P+ + C G ++ ++ GD+P K C GG + C G T LRA
Sbjct: 85 LPLKPPTYQCAAGHLACSS---CHGDVPGKKCHTCGGGGGGGVY-ARCPGLDTF--LRAA 138
Query: 270 RYALPTRFPKCRS---FH*VA*SHRKA 199
+ P CRS +H VA +H++A
Sbjct: 139 KILCPNDLFGCRSYVAYHDVA-AHQRA 164
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 268 PSGPQLSTGASARTLPSPAARCIPPPRL 351
P GP T +S+ +LPS R PPPRL
Sbjct: 4 PPGPAPGTSSSSSSLPSRRRR-RPPPRL 30
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 279 AAVHRCKRPNTPITSCTMHPSP 344
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 327 TMHPSPPPANRSSGEYRRXGPCHCS---WT 407
T PPP NR +R PC C+ WT
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCADVLWT 156
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 300 RPNTPITSCTMHPSPPPANR--SSGEYRRXG 386
RPN P+ P PPP N + E RR G
Sbjct: 574 RPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 274 GPQLSTGASARTLPSPAARCIPPP 345
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 292 GASARTLPSPAARCIPPPRLRTG 360
G+S +L SP A PPP LRTG
Sbjct: 155 GSSIFSLKSPLAWTQPPPSLRTG 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,325,643
Number of Sequences: 37544
Number of extensions: 396986
Number of successful extensions: 1647
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -