Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0410
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910...    29   3.5  
10_08_0379 - 17373533-17374147                                         28   8.1  

>09_03_0038 +
           11790075-11790302,11790397-11790542,11790915-11791017,
           11791148-11791334,11791466-11791559,11791702-11791855,
           11792189-11792305,11792695-11792808,11793629-11793811,
           11794209-11794494,11794592-11794713,11794746-11794802,
           11794803-11794900,11795036-11795213,11795355-11795455,
           11795530-11795629,11795751-11795828,11796785-11796862,
           11796956-11797138
          Length = 868

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 288 VASFCHTIYGFRQLNDYNLLKSLNVDIWMSLDDSI 184
           ++S  H +Y FR   DY++L  +N DI + + + +
Sbjct: 554 LSSLLHLLYAFRDEADYSVLSHINSDIQLFVGNDL 588


>10_08_0379 - 17373533-17374147
          Length = 204

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 59  KHTGRSVFSSYQKKKKYIPPFPKSA 133
           +H  R+   SY+KKK+  PP P SA
Sbjct: 153 EHQARARGVSYEKKKRKKPPHPSSA 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,927,437
Number of Sequences: 37544
Number of extensions: 290719
Number of successful extensions: 491
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)