Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0409
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6B45 Cluster: PREDICTED: similar to CG11035-PA...    33   6.9  
UniRef50_Q48KM4 Cluster: Transcriptional regulator, LuxR family;...    33   9.2  
UniRef50_A5BCX1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_Q86I54 Cluster: Similar to Leishmania major. Ppg3; n=2;...    33   9.2  
UniRef50_A2DVS1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_UPI0000DB6B45 Cluster: PREDICTED: similar to CG11035-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG11035-PA - Apis mellifera
          Length = 113

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 221 HIRLKSQKTSDFNLSTETLAQHLTGNTTQRVYGF 120
           H+  K +K   +N++    + H TGNTT R+Y F
Sbjct: 76  HLHHKHKKMKTYNVNETRNSYHYTGNTTGRIYDF 109


>UniRef50_Q48KM4 Cluster: Transcriptional regulator, LuxR family;
           n=3; Pseudomonas syringae group|Rep: Transcriptional
           regulator, LuxR family - Pseudomonas syringae pv.
           phaseolicola (strain 1448A / Race 6)
          Length = 240

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 403 CKIYSAIIWLFGNHCRGTDKARAVITSGIGGQSLGTSIEF 522
           C++  AI + + NHCRG D   +V T G  G+++    ++
Sbjct: 117 CELLPAISYGYMNHCRGADSVTSVCTLGEVGRAISAEQKY 156


>UniRef50_A5BCX1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1091

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 542 RFLATRXNSMEVPSDCPPIPLVITARALS 456
           R +    +S EVP D PP+PL+   RALS
Sbjct: 598 RVVTPPLSSAEVPDDSPPVPLISPTRALS 626


>UniRef50_Q86I54 Cluster: Similar to Leishmania major. Ppg3; n=2;
           Dictyostelium discoideum|Rep: Similar to Leishmania
           major. Ppg3 - Dictyostelium discoideum (Slime mold)
          Length = 474

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 506 EPPSSSHASQENA--TVSSHETRXGFSEKTLVQENSNGARI*HRPRHD 643
           + PSSSH+S E++  T SSHE+    S      E+S      H   HD
Sbjct: 269 QAPSSSHSSSESSPNTASSHESSHDVSSNNPSSESSENTASLHASSHD 316


>UniRef50_A2DVS1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 673

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
 Frame = +1

Query: 289 THLLITTAKEEF-----SHSSRSQLMALLRIQSDWYIYFWLLYCKIY---SAIIW---LF 435
           +H LI+   E+F     S S++S L + L+   +W + ++L   K+Y   + I W   +F
Sbjct: 555 SHYLISGTVEQFLRQLASESNQSYLWSALKKNQEWSLSWYLFLLKLYKEDTLIQWFSEIF 614

Query: 436 GNHCRGTDKARAVITSGIGGQSLGTSI 516
            NH     K+ A  +S +   ++ T++
Sbjct: 615 NNHKATLQKSYAPCSSVLDSTAINTAL 641


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,462,619
Number of Sequences: 1657284
Number of extensions: 15073097
Number of successful extensions: 37488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)