Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0408
(770 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 30 0.024
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 30 0.024
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 23 2.7
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 4.7
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 4.7
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 6.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 6.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.2
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 6.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 6.2
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.024
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -2
Query: 508 VYCIHPFRCXMPLLIQAWGDI-RVVKQGMVLHKCVEFMFQFYCVE---IVINKFHSTPIK 341
+Y ++ + ++ ++G + ++ QG+ + FM FYC+ I+ N+ H K
Sbjct: 280 MYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLYIICNEGHHATRK 339
Query: 340 TGPFPEFFQR 311
G PEF +R
Sbjct: 340 MG--PEFRER 347
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 29.9 bits (64), Expect = 0.024
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -2
Query: 508 VYCIHPFRCXMPLLIQAWGDI-RVVKQGMVLHKCVEFMFQFYCVE---IVINKFHSTPIK 341
+Y ++ + ++ ++G + ++ QG+ + FM FYC+ I+ N+ H K
Sbjct: 280 MYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFYCMTLLYIICNEGHHATRK 339
Query: 340 TGPFPEFFQR 311
G PEF +R
Sbjct: 340 MG--PEFRER 347
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 543 CSYLFKW*KIFMYIAYILFVAICL 472
CS+ + K+ +Y+A++ +A C+
Sbjct: 149 CSWTSRRSKVMVYLAWVASLAFCI 172
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 254 YTVPSDDVLKQYFPDLPSGPLEKFRKRASFDWRRMKFIYD 373
Y P D L+ PDL RK A + R + ++D
Sbjct: 404 YIRPGDTPLEDINPDLAEAFSSYARKNARLSFGRAEPVFD 443
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 254 YTVPSDDVLKQYFPDLPSGPLEKFRKRASFDWRRMKFIYD 373
Y P D L+ PDL RK A + R + ++D
Sbjct: 229 YIRPGDTPLEDINPDLAEAFSSYARKNARLSFGRAEPVFD 268
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 392 LKHEFYTFMENHTLFHHSDVTPSLDE 469
LKH+ Y +E H F + + S D+
Sbjct: 28 LKHDNYYELETHIFFDDAFIRTSEDD 53
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 392 LKHEFYTFMENHTLFHHSDVTPSLDE 469
LKH+ Y +E H F + + S D+
Sbjct: 342 LKHDNYYELETHIFFDDAFIRTSEDD 367
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 392 LKHEFYTFMENHTLFHHSDVTPSLDE 469
LKH+ Y +E H F + + S D+
Sbjct: 575 LKHDNYYELETHIFFDDAFIRTSEDD 600
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 392 LKHEFYTFMENHTLFHHSDVTPSLDE 469
LKH+ Y +E H F + + S D+
Sbjct: 575 LKHDNYYELETHIFFDDAFIRTSEDD 600
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 337 GPFPEFFQRTGRQ 299
GP P +F +TGR+
Sbjct: 301 GPHPTYFGKTGRK 313
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 6.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -3
Query: 258 VYFLFPFSYKNSA*RKTRSN*FCTLTDGTNYNELQNTYLC 139
++ L Y+ + R +++ FCTL Y L LC
Sbjct: 385 IFGLVNLKYRETYFRLSKTKTFCTLVTALVYCSLAIFVLC 424
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,165
Number of Sequences: 336
Number of extensions: 4188
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -