Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0407
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   5.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   5.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = +3

Query: 321 LNRKVQQIDEDLEKSXXXSGTXXXXXXXXXXXXDENNRMCKVLENRAQXDXERMDQLTNQ 500
           LNR+V QI +D+E     S              DE  R   + EN      E +D L N 
Sbjct: 294 LNREVDQIKQDVEDLKRWS-DRIYAAIHQGSVTDERGRSITLTEN------EGIDILGNM 346

Query: 501 LXEPVSSP 524
           +   + SP
Sbjct: 347 IESSILSP 354


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 180 RGSPRTPEEARPGGGRPDPEQE 245
           RG PRTP + +   G+  P+++
Sbjct: 58  RGPPRTPLQPKLVAGKLKPKRQ 79


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 247 CSCSGSGLPPPGRASSGVRGLPRLPSQHG 161
           C   G   P PG  S  V G P + S HG
Sbjct: 131 CLSGGPKHPDPG--SLQVPGAPMMMSSHG 157


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 273 EEKEKQLTATEAEVAALNRKVQQIDEDLEK 362
           +E+EK+L+  EAE      + +  D+D  K
Sbjct: 217 KEREKELSDDEAEEEKKEEEGEDKDKDKPK 246


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 83 IFFLIASMVAAFC 45
          +FF +A++ AA+C
Sbjct: 8  LFFAVATLFAAYC 20


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 178 NEEVRELQKKLAQVEED 228
           N+E+R  ++K  +VEED
Sbjct: 98  NQEIRGPKRKTWKVEED 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,155
Number of Sequences: 336
Number of extensions: 1642
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)