Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0407
(547 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 49 2e-06
SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08) 36 0.022
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.15
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 32 0.35
SB_57972| Best HMM Match : Phage_integrase (HMM E-Value=0.85) 31 0.46
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_58936| Best HMM Match : GBP (HMM E-Value=2.2e-05) 31 0.61
SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11) 31 0.81
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 30 1.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 1.1
SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 1.4
SB_28246| Best HMM Match : M (HMM E-Value=0.0007) 29 1.9
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 29 1.9
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 2.5
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 29 2.5
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 29 2.5
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 29 2.5
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_46930| Best HMM Match : PWWP (HMM E-Value=0.017) 28 4.3
SB_45073| Best HMM Match : ERM (HMM E-Value=0) 28 4.3
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 28 4.3
SB_31348| Best HMM Match : ERM (HMM E-Value=0) 28 4.3
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17) 28 5.7
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 28 5.7
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 7.6
SB_45991| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.074) 27 7.6
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 27 7.6
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 27 7.6
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +3
Query: 255 QANKDLEEKEKQLTATEAEVAALNRKVQQIDEDLEKSXXXSGTXXXXXXXXXXXXDENNR 434
+A +L+ + + E EVAAL +++QQ+++DL+ + DE+ R
Sbjct: 24 KAEDELKNANDRADSAETEVAALTKQLQQLEDDLDAAESKLADTQGQLTEAEKQADESER 83
Query: 435 MCKVLENRAQXDXERMDQLTNQ 500
KVLENR D ER+ L Q
Sbjct: 84 ARKVLENRGASDEERLASLERQ 105
>SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08)
Length = 277
Score = 35.9 bits (79), Expect = 0.022
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = +3
Query: 231 DPEQEQT*QANKDLEEKEKQLTATEAEVAALNRKVQQIDEDLEKSXXXSGTXXXXXXXXX 410
D +++ A + L E E++ E E + R++Q I+ + + S
Sbjct: 22 DETEDRELAAMEKLREAEERFEKAEGEAESFKRRIQLIEAESRRVKELSQKKDHELEEMH 81
Query: 411 XXXDENNRMCKVLENRAQXDXERMDQLTNQLXEPV 515
E +CK LE + E+M +L + L E +
Sbjct: 82 KRSKEEENLCKTLEVTDRESDEKMRELEDALEEAI 116
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 58 TMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLIL 237
++ A+K+KMQ +K D A ++ + + + A R E E +Q+++ + E+L
Sbjct: 2 SLTAVKEKMQMIKDSIDEAEERESNAKLELKEARAREEAQLAEAESMQRRILLLSEELRK 61
Query: 238 NKNKLD 255
+ +L+
Sbjct: 62 TEERLE 67
>SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 33.9 bits (74), Expect = 0.087
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +1
Query: 61 MDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDL 231
MD +++KMQ +K + + A ++ + + + A RA + ++ +QK++ + EDL
Sbjct: 2 MDKVREKMQGIKNKIEEAEEREAMAKMELKDAEERAYQHESDLDSMQKRINLLSEDL 58
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +1
Query: 61 MDAIKKKMQAMKLEKDNAMDKADTCEQQARXAN---LRAEKVNEEVRELQKKLAQVEEDL 231
MDA+KK M+ ++ + + A+ K + E+ R N L EK N+ RE K++ EE++
Sbjct: 1501 MDALKKDMRRVEADYETAIQKIENMEKANRSVNEKILIIEKSNDRDRENAKRME--EENI 1558
Query: 232 ILNK 243
L +
Sbjct: 1559 NLKR 1562
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 106 DNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVE-EDLILNKNKLD 255
+NA K + + A + + E+ LQK+LAQ+E E I +K ++D
Sbjct: 2449 ENAKRKNHDLQAELEAARQSKDNLQEDFDNLQKRLAQLEAEQEIYSKTRMD 2499
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +1
Query: 58 TMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDL 231
T+ ++ K ++ + N K E + + + + +N E+ QK++A +EEDL
Sbjct: 1725 TLTEVQTKKGELEADVYNLKRKLGESELKLQMSLTENDNLNAELINAQKRIASLEEDL 1782
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 255 QANKDLEEKEKQLTATEAEVAALNRKVQQIDEDLEKS 365
QA +DL+ + Q T E + A L +K++ +++DLE++
Sbjct: 1331 QAEQDLQASKNQQTRLEQQKANLEQKIKHLEDDLEQA 1367
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 73 KKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVE 222
K+K + E+D A K T E + EK NEEV LQ+K+ +++
Sbjct: 56 KRKYDDVIEERDEAARKLTTLEDKLSSLKSIEEKKNEEVNNLQEKIDELQ 105
>SB_57972| Best HMM Match : Phage_integrase (HMM E-Value=0.85)
Length = 264
Score = 31.5 bits (68), Expect = 0.46
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +1
Query: 70 IKKKMQAMKLEKD---NAMDKADTCEQQARXANLRAEKVNEEVRELQ-KKLAQVEEDLIL 237
++K + ++LE+ +A+DK EQ + ANLR ++ E+ E++ + + E++ L
Sbjct: 33 LEKTRELLRLEQSALRDALDKLSREEQASLEANLRRTQLRNELSEVELLQDSTANENVSL 92
Query: 238 NKNKL 252
N++KL
Sbjct: 93 NRDKL 97
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 195 TPEEARPGGGRPDPE--QEQT*QANKDLEEKEKQLTATE 305
+PE PG +PD E QEQ + + + EE++K+++ E
Sbjct: 221 SPEPGSPGSPKPDAEEGQEQNEEGDAEKEEEQKEMSLEE 259
>SB_58936| Best HMM Match : GBP (HMM E-Value=2.2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 KKKMQAMKLEKD-NAMDKADTCEQQARXA-NLRAEKVNEEVRELQKKLAQVEEDLILNKN 246
K+ +A K EKD N M++ E+ R A + K+N+ ELQ ++A +++ + ++
Sbjct: 384 KRLKEAAKFEKDKNIMNQELATEKAQRLAVEEESNKINQRAMELQHEIASLQDQVRHSEQ 443
Query: 247 KL 252
+L
Sbjct: 444 RL 445
>SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11)
Length = 285
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = +1
Query: 70 IKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 249
+ K++ K E K D ++ + ++ N+EV E++ K+ + +++ K K
Sbjct: 195 LSKEVNETKKEVQETKTKVDEANKEVHEVKGKVDETNKEVHEVKGKVDETNKEVHEVKGK 254
Query: 250 LD 255
LD
Sbjct: 255 LD 256
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +1
Query: 4 PSRGGVFNSTG---P*QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEK 174
PSR G + +G P + A D + M+ + E+D A+ +A+ ++ +
Sbjct: 1419 PSRSGDMSMSGEIDPETVRVALRD-FAQSMKEAERERDEAVTRANNLQRALAELEEERTR 1477
Query: 175 VNEEVRELQKKLAQVEED 228
+++ ++ +QK L + EE+
Sbjct: 1478 MDQRMQSIQKSLGESEEE 1495
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 76 KKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 249
KK +++ E A + + + A + K+ EE+ E K + ++E + N+NK
Sbjct: 3102 KKASSLECELSTANENLKEAQNNCKDAEIEVSKLREEIIESHKTIKEMEICIEENQNK 3159
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 73 KKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNKL 252
K +++ + D A K EQ N + EE+ + KKL+ +E++L ++NK+
Sbjct: 2629 KDSNYSLQDDLDTANRKMCEMEQNFTFLNDKIRTQKEELIDSHKKLSGLEQELFGSRNKI 2688
>SB_20162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 49 KAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVR-ELQK 204
K T +A K+K + +LEKD + A E++ + +R EK N +++ ELQK
Sbjct: 196 KQLTNEATKRKERIAQLEKD--LSSAREQERETKQEVVRLEKANRKMQVELQK 246
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 79 KMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLD 255
+ Q+ ++D D+ D ++ + K+ EVRE Q+ + +E+ L +K+D
Sbjct: 259 QFQSTVKQRDTLRDQVDDLRKELQRCREIISKLQNEVRENQRVANKAKEECALKDHKID 317
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 28 STGP*QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKK 207
+ G + A D+ + K+ ++ E + M + + LR + + EE+ +LQKK
Sbjct: 2107 NNGKNDMRIALQDS-QNKLGGLEEELQSEMKQQAQLKGVLEQTKLRNDNLKEEILKLQKK 2165
Query: 208 LAQVEE 225
LA+ ++
Sbjct: 2166 LAEQQK 2171
>SB_28246| Best HMM Match : M (HMM E-Value=0.0007)
Length = 1121
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 10 RGGVFNSTGP*QQKAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEV 189
RG V N T ++ ++ + +K+Q M+ E + D C + + N + E + E
Sbjct: 309 RGEVQNLTSELHRRDTSVANVSEKLQRMERELRETNTRYDRCAAELQVTNAQLEALRLEN 368
Query: 190 RELQKKLA 213
R L+ A
Sbjct: 369 RHLRDAAA 376
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 61 MDAIKKKMQAMKLEK--DNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVE 222
++A K K + LE+ + +K + E+ R N + EEV L++KLA +E
Sbjct: 914 LEAEKTKSSIVSLERKLEEVCNKKNVVEKLLREKNASCTDLQEEVYRLKEKLANME 969
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +1
Query: 49 KAATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEED 228
K AT+ + Q ++ EKD + +QQA + E+ E R+L K +++ + +
Sbjct: 309 KEATLVKEHLEHQRVEKEKDALKAELQRMKQQAAESKAYIEQQEAEERKLLKIISEADAE 368
Query: 229 LILNKNKLD 255
+ K +LD
Sbjct: 369 RMRQKKELD 377
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 177 KRGSPRTPEEARPGGGRPDPEQEQT*QANKDLEEK--EKQLTATEAEVAALNRKVQQIDE 350
K+G P T EA+P +P E+E A K +EEK EK + E +V + K ++ E
Sbjct: 5098 KKGKP-TEREAKPFEEKPLIEEELPISAEKVVEEKPLEKPIARKEKKVEKVKPKKEKPTE 5156
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 73 KKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 249
+++ + K E++ A KAD E+ R N+ + E +KKL + E +L+ + K
Sbjct: 199 RREAEKRKAEEEEARRKADELEKIKRQQEDEERLKNQRLDEERKKLEEEEANLMEEERK 257
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +1
Query: 46 QKAATMDAIKKKMQAMKLEKDNAMDKADTCE---QQARXANLRAEK-----VNEEVRELQ 201
QK A + + +Q MK ++D+ ++ T + ++ + N E+ +N+++ E Q
Sbjct: 1794 QKDADLTKSSQDLQMMKKKEDSLHERIQTLQDDVEKLKAVNRDREQTLKQELNKQMSESQ 1853
Query: 202 KKLAQVEEDLILNKNKLD 255
+K A+ E +I NK++ D
Sbjct: 1854 RKDAERIEQIIHNKSEFD 1871
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +1
Query: 58 TMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLIL 237
T D KM+ ++ +KD + K + E++ + A + ++ E + + + + A + L
Sbjct: 246 TKDEFVTKMEKLRAKKDEMLKKIEEFEEREKAAMKKIARLEEVIAKDKNESATLRRSCSL 305
Query: 238 NKNKLD 255
+++ D
Sbjct: 306 TEHQFD 311
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 46 QKAATMDAIKKKMQAMKLEKD-NAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVE 222
QK T AIKKK++A + K+ N +D T A+ + + V E ++L ++ A+ +
Sbjct: 787 QKRPTFSAIKKKLKANGMGKNLNIVDNMIT--MMAKYTDQLEDIVEERTKQLAEEKAKTD 844
Query: 223 E 225
E
Sbjct: 845 E 845
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +1
Query: 70 IKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNKNK 249
++ K+ MK + D D+ + CE R NL+ + + + + A E+ + ++
Sbjct: 1480 MENKLSEMKSKADEYTDQLEHCEDTIREMNLKIHSLESNIDQKDHENAMKEDAINQLSSE 1539
Query: 250 LD 255
+D
Sbjct: 1540 MD 1541
>SB_54212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 106 DNAMDKADTCEQQARXANLRAEKVNEEV-RELQK---KLAQVEEDLILNKNK 249
+ + +A+ E++A +R EKV+E+V RE+ K ++ L+++KNK
Sbjct: 125 EEILRRANVSEEEANKELIRVEKVDEKVDREIPKTNTSFKSSKKGLVVSKNK 176
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 64 DAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRA----EKVNEEVRELQKKLAQVEE 225
D + K+ ++++ + D+ + R A+ + EK+N E+RE +KK+ ++E+
Sbjct: 716 DELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKDTEKLNAEIREFKKKIVELEK 773
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 4.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 43 QQKAATMDAIKKKMQAM-KLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQV 219
+QKA + ++ AM K+EK+ A KA E Q A A K EE+R+ Q Q
Sbjct: 1133 EQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQK--AIEAARKKQEEIRQKQAAWRQQ 1190
Query: 220 EED 228
EE+
Sbjct: 1191 EEE 1193
>SB_46930| Best HMM Match : PWWP (HMM E-Value=0.017)
Length = 237
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 97 LEKDNAMDKADTCEQQARXANLRAEKVNEEVREL 198
++K+ AM+K++ E++A+ A RAE+ + +EL
Sbjct: 141 VDKELAMEKSERIERRAKLAAGRAERARKRSKEL 174
>SB_45073| Best HMM Match : ERM (HMM E-Value=0)
Length = 504
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 264 KDLEEKEKQLTATEAEVAALNRKVQQIDEDLEK 362
K LEEK KQ A + E+ A + ++I E+LEK
Sbjct: 315 KLLEEKLKQSEAEKEEMRAAQEEERRIKEELEK 347
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 210 RPGGGRPDPEQEQT*QANKDLEEKEKQLTATEA 308
RPGG + E++ T Q+N D +++ Q TEA
Sbjct: 469 RPGGPDMEEEEKATPQSNGDASDEKAQSEQTEA 501
>SB_31348| Best HMM Match : ERM (HMM E-Value=0)
Length = 665
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 64 DAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDL 231
+ ++ ++Q ++ E D+ + E+ A +A EE LQ+K EE+L
Sbjct: 167 EELQARLQELQNEADSCREALMRSEETAELLAEKARVAEEEATLLQRKATDAEEEL 222
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 64 DAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLI 234
+ +K ++ KLE N+ + Q R A+ R + ++ ELQ+K Q E L+
Sbjct: 567 ELLKHRLNDAKLELGNSERELSNKTQDNRLADKRMNSLRPKIIELQRKKQQYMEVLM 623
>SB_48647| Best HMM Match : Pencillinase_R (HMM E-Value=0.17)
Length = 1084
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 64 DAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDLILNK 243
DA+ KK+ + E DKA + + +N+ ++ E + L ++ Q ++ L +K
Sbjct: 285 DALIKKVADVARENRAIKDKATSLARNLHESNMESKASRETIMRLVSEVGQEKKALDGHK 344
Query: 244 NKLD 255
++D
Sbjct: 345 QQMD 348
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 291 LTATEAEVAALNRKVQQIDEDLEKSXXXSGTXXXXXXXXXXXXDENNRMCKVLENR 458
++A + ALN+++ +++E+L+K+ + T E CK LE +
Sbjct: 250 MSANKDAEMALNKRLSEVNEELKKAESKNATLIGDLSSARESLKEKEANCKKLEQQ 305
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 264 KDLEEKEKQLTATEAEVAALNRKVQQIDEDL 356
K LE +L A E +++ + K+Q++DE+L
Sbjct: 3493 KALEAANAELAAAEEKLSKIKAKIQELDENL 3523
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +3
Query: 240 QEQT*QANKDLEEKEKQLTATEAEVAALNRKVQQIDEDLEKS 365
++Q + DL+ +K++ +AEV L +V+++ ++L K+
Sbjct: 322 KKQLQEKTADLDHSQKRVEQHDAEVKKLRARVEELKQELAKA 363
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 267 DLEEKEKQLTATEAEVAALNRKVQQIDEDLEKS 365
D + + QL +A ++ALN K+++ + LEK+
Sbjct: 962 DYSQAQHQLVLKDASISALNDKLEERNAQLEKA 994
>SB_45991| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.074)
Length = 134
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 76 KKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEED 228
++++ MK +++ + + + + +K EEV EL+K+LA E+D
Sbjct: 1 EQVEEMKKKEERMEKQMNEIMAENKRLTEPLQKAREEVEELRKQLANYEKD 51
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 135 RTAG*XRQPPC*EGKRGSPRTPEEARPGGGRPDPEQEQT*QANKDLEEKEKQLTATEAEV 314
RT G P + K +PR P+E +P + E+ A + ++ K K ++ +
Sbjct: 872 RTGGEGEDKPKKQRKPRAPRAPKEKKPRKDKKSAANEERLSAKQRMKIKSKAYVSSSEDS 931
Query: 315 AALNR---KVQQIDEDLEKS 365
+ + K+ + D EK+
Sbjct: 932 SDSDNDKLKITDVGSDDEKA 951
>SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 171 EGKRGSPRTPEEAR----PGGGRPDPEQEQT*QANKDLEEKEKQLTATEAEVAALNRKVQ 338
E KRG PRTPE++R P + E E T ++ L E+ KQ + V
Sbjct: 478 EMKRGKPRTPEKSRRRKSPEVRKRTNESESTSIDSEVLSEEVKQSRDIDDTSMDSTSSVL 537
Query: 339 QIDED 353
++ED
Sbjct: 538 PVNED 542
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 526 IGEETGSXNWLVSWSIRSSSCCALFSNTLH 437
IG+ G + L +W R ++C +++TLH
Sbjct: 3 IGKTGGRKSLLENWKFRQNTCKQYYTDTLH 32
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 76 KKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEE 225
KK++ KLEK+ D + + N ++E + + ++Q K Q+EE
Sbjct: 401 KKLEVSKLEKELRTAMQDLDNSKVQKENEKSETILKLKADIQAKDEQIEE 450
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 123 GRHLRTAG*XRQPPC*EGKRGSPRTPEEARPGGGRPDPEQEQT*QANKDLEEKEKQ 290
GRH A +P +G+P + + +RP GRP +E+ + KD K +
Sbjct: 160 GRHAPPAKRPEKPGDRRAGKGAPPSNKPSRPAHGRPGHSKERK-EGEKDKGRKSDE 214
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 55 ATMDAIKKKMQAMKLEKDNAMDKADTCEQQARXANLRAEKVNEEVRELQKKLAQVEEDL 231
A + K+ +K D K + +++ + A L+ ++ + + +KLA++E+DL
Sbjct: 1873 AVYSEVNTKLAKIKTPLDAIEAKVNNRQEKLQLAVLQTQEFQTTLDDFTEKLAKIEDDL 1931
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,268,830
Number of Sequences: 59808
Number of extensions: 223765
Number of successful extensions: 999
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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