Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0406
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   7.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   7.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   7.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = +3

Query: 666  LLCGCL--TEGVWCCKI 710
            +L GC+  TEG+W C +
Sbjct: 1161 ILSGCIIFTEGIWICSL 1177


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 404 YDMHAAITIFILKY*EMYAATTRSATEPSAAN 309
           YD H A   F+  Y  +YA+      E    N
Sbjct: 208 YDFHGAFEPFVGHYAPLYASHLDQTDEQKTLN 239


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 404 YDMHAAITIFILKY*EMYAATTRSATEPSAAN 309
           YD H A   F+  Y  +YA+      E    N
Sbjct: 209 YDFHGAFEPFVGHYAPLYASHLDQTDEQKTLN 240


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 404 YDMHAAITIFILKY*EMYAATTRSATEPSAAN 309
           YD H A   F+  Y  +YA+      E    N
Sbjct: 209 YDFHGAFEPFVGHYAPLYASHLDQTDEQKTLN 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,449
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)