Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0406
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   6.1  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.1  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YKYYTFNH*RTNYNIFY 569
           YKY  +N+   NYN  Y
Sbjct: 89  YKYSNYNNYNNNYNTNY 105


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 166 CWWACDRCQ 140
           C W CD+C+
Sbjct: 466 CCWVCDQCE 474


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 166 CWWACDRCQ 140
           C W CD+C+
Sbjct: 556 CCWVCDQCE 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,178
Number of Sequences: 438
Number of extensions: 3643
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)