Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0406
         (839 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g53100.1 68418.m06597 oxidoreductase, putative similar to for...    28   8.9  

>At5g53100.1 68418.m06597 oxidoreductase, putative similar to
           forever young oxidoreductase (FEY3) GI:12004621 from
           [Arabidopsis thaliana]
          Length = 364

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 446 VQTK-SSTLPAVRQHYDMHAAITIFILKY*EMYAATTRSATEPSAANHSQEL 294
           VQT  +  LP + Q  D+++A+  FI    E   ++  SAT+P   NH Q+L
Sbjct: 250 VQTNITRDLPRLVQ--DLYSALPYFIFSPQEGCRSSLFSATDPQIPNHYQKL 299


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,912,557
Number of Sequences: 28952
Number of extensions: 236718
Number of successful extensions: 415
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1941125600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)