Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0404
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB... 109 6e-23
UniRef50_O15371 Cluster: Eukaryotic translation initiation facto... 100 5e-20
UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-P... 72 9e-12
UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma j... 63 4e-09
UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium discoide... 60 4e-08
UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation facto... 52 1e-05
UniRef50_O94236 Cluster: Eukaryotic translation initiation facto... 51 2e-05
UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of str... 48 2e-04
UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2... 41 0.025
UniRef50_P30642 Cluster: Putative eukaryotic translation initiat... 40 0.032
UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation facto... 38 0.13
UniRef50_P74081 Cluster: PolyA polymerase; n=4; Cyanobacteria|Re... 34 2.8
UniRef50_A7AVX3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A4F715 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
>UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10161-PB - Tribolium castaneum
Length = 228
Score = 109 bits (261), Expect = 6e-23
Identities = 46/62 (74%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
Frame = +1
Query: 88 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWT--MVQDKKYQNKYAHS 261
+F++P+IQDNPTGWGP E+PDQF+DMPYQPFSKGD LGKISDWT QDKKY NKYA
Sbjct: 12 KFVAPVIQDNPTGWGPCELPDQFKDMPYQPFSKGDRLGKISDWTGAAFQDKKYANKYASQ 71
Query: 262 SG 267
G
Sbjct: 72 FG 73
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/34 (88%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = +3
Query: 255 SQFGAGSSYAYFHDEDESTFHLVDTTRVQK-PYQ 353
SQFG+GS YAY+HDEDESTFHLVDTTRVQK PYQ
Sbjct: 70 SQFGSGSQYAYYHDEDESTFHLVDTTRVQKPPYQ 103
>UniRef50_O15371 Cluster: Eukaryotic translation initiation factor 3
subunit 7; n=40; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 7 - Homo sapiens (Human)
Length = 548
Score = 99.5 bits (237), Expect = 5e-20
Identities = 40/62 (64%), Positives = 51/62 (82%), Gaps = 2/62 (3%)
Frame = +1
Query: 88 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWT--MVQDKKYQNKYAHS 261
+F++P+IQDNP+GWGP +P+QFRDMPYQPFSKGD LGK++DWT QDK+Y NKY+
Sbjct: 3 KFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQ 62
Query: 262 SG 267
G
Sbjct: 63 FG 64
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3
Query: 255 SQFGAGSSYAYFHDEDESTFHLVDTTRVQK 344
SQFG GS YAYFH+EDES+F LVDT R QK
Sbjct: 61 SQFGGGSQYAYFHEEDESSFQLVDTARTQK 90
>UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-PA -
Drosophila melanogaster (Fruit fly)
Length = 551
Score = 72.1 bits (169), Expect = 9e-12
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +1
Query: 91 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWT-MVQDKKYQNKYAHSSG 267
FI P ++ N GWGP E+P+ D+PYQPF K D LGKI DWT MV +KK+ +KYA + G
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +3
Query: 231 QEVPEQICSQFGAGSSYAYFHDEDESTFHLVDTT--RVQKPYQ 353
++ P + S FG S YAYF+++D+STFHLVDTT + KPYQ
Sbjct: 53 KKFPSKYASTFGNNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
>UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06210 protein - Schistosoma
japonicum (Blood fluke)
Length = 648
Score = 63.3 bits (147), Expect = 4e-09
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWT--MVQDKKYQNKY 252
F S + +NP GWGP ++P +F++MP+QPFSK LG+++DW+ + QD K + +Y
Sbjct: 9 FGSLSLNENPAGWGPTDIPMEFKNMPFQPFSKDTRLGRVADWSGNIFQDMKTKGRY 64
Score = 36.7 bits (81), Expect = 0.40
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 270 GSSYAYFHDEDESTFHLVDTTRVQK 344
GS YAY+HDED++ F LV + R K
Sbjct: 70 GSQYAYYHDEDDNNFQLVSSVRETK 94
>UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium
discoideum|Rep: EIF-3 zeta - Dictyostelium discoideum
AX4
Length = 527
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +1
Query: 106 IQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDW-TMVQDKKYQN 246
I+ NPTGWGP ++F D+PY PFSKGD +GK SDW + V++ + QN
Sbjct: 8 IKVNPTGWGPVGKLEKFTDIPYAPFSKGDKIGKCSDWNSNVRNYQRQN 55
>UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation factor 3
subunit 7, putative; n=1; Filobasidiella neoformans|Rep:
Eukaryotic translation initiation factor 3 subunit 7,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 547
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +1
Query: 91 FISPIIQDNPTG-WGPYE--MPDQFRDMPYQPFSKGDXLGKISDW 216
F+ P I DN G WGP +P QF+D+PY PFSK D + +I+DW
Sbjct: 4 FVLPPIHDNSDGSWGPSTSTLPAQFKDIPYAPFSKSDKITRIADW 48
>UniRef50_O94236 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=3; Schizosaccharomyces pombe|Rep:
Eukaryotic translation initiation factor 3 subunit 7
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 567
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 91 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWTMVQDK 234
F P + + WGP E D+PY PFSKGD LGKI+DW++ Q K
Sbjct: 5 FKLPELAPVKSAWGPPETEQIGGDIPYAPFSKGDRLGKIADWSVDQPK 52
>UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 532
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +1
Query: 100 PIIQDNPTGWGPYE-MPD--QFRDMPYQPFSKGDXLGKISDWTM-VQDKKYQNK 249
P + D WGP +P+ +F D+PY PFSKGD LGK++DW +D K Q +
Sbjct: 6 PALLDANAPWGPPSTVPEDLKFDDVPYAPFSKGDKLGKVADWAAETKDGKDQKR 59
>UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2;
Sclerotiniaceae|Rep: Translation initiation factor eIF3
- Botryotinia fuckeliana B05.10
Length = 600
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 94 ISPIIQDNPT--GWGPYEMPDQ-FRDMPYQPFSKGDXLGKISDWT 219
+S II P+ WGP + +PY P+SKGD LG+++DWT
Sbjct: 6 LSDIISALPSEDSWGPSTTSETTLNGVPYAPYSKGDKLGRMADWT 50
>UniRef50_P30642 Cluster: Putative eukaryotic translation initiation
factor 3 subunit 7; n=2; Caenorhabditis|Rep: Putative
eukaryotic translation initiation factor 3 subunit 7 -
Caenorhabditis elegans
Length = 570
Score = 40.3 bits (90), Expect = 0.032
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 106 IQDNPTGWGPYEMPDQFRD-MPYQPFSKGDXLGKISDWTMVQDKKYQ 243
+ DN GWGP + +P+Q F+K D +G+++DW V D+ Y+
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGV-DRFYR 56
>UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=15; Dikarya|Rep: Eukaryotic
translation initiation factor 3 subunit 7 homolog -
Coccidioides immitis
Length = 598
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 127 WGPYEMPDQFRD-MPYQPFSKGDXLGKISDW 216
WGP D +PY PFSKGD LG+++DW
Sbjct: 20 WGPPVPTGNHLDGVPYAPFSKGDKLGRMADW 50
>UniRef50_P74081 Cluster: PolyA polymerase; n=4; Cyanobacteria|Rep:
PolyA polymerase - Synechocystis sp. (strain PCC 6803)
Length = 942
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 145 PDQFRDMPYQPFSKGDXLGKISDWTMVQDKKYQNKYAHSSGLVRLMHTSMMKMKAPFTWW 324
PD+ R + +GD LGK +DW + + Y H R + + +++A
Sbjct: 61 PDKIRSLYIVDNQQGDRLGKAADWLTLPHLRQVAIYDHHLNSPRDIEADIWELEAVGAST 120
Query: 325 TLLEYKSRTSHISVGGLEDS 384
TL+ K + + IS+ +E S
Sbjct: 121 TLIVEKLQRADISLSMVEAS 140
>UniRef50_A7AVX3 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 463
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 130 GPYEMPDQFRDMPYQPFSKGDXLGKISDWTMVQDKKYQNKYAHSSGLVRLMHTSMMK--M 303
GP +P F DM PF K + ++ TM+ KY +Y ++ + T + +
Sbjct: 164 GPISVPYDFDDMECHPFIKKSRIRPYANGTMLSSSKY--RYVKKRLVIHRLPTLLNDEII 221
Query: 304 KAPFTW 321
+PFTW
Sbjct: 222 ISPFTW 227
>UniRef50_A4F715 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 155
Score = 32.3 bits (70), Expect = 8.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 115 NPTGWGPYEMPDQFRDMPYQPFSKGDXLGKISDWTMVQDKKYQNKYAHS 261
+PT WG E+ D++RD Y+ +G+ G + + D Y Y S
Sbjct: 90 SPTKWGAEEVKDEYRDAEYRAPRQGE-TGDAPQFLIEADDLYDEDYGES 137
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,374,457
Number of Sequences: 1657284
Number of extensions: 10253228
Number of successful extensions: 21002
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20984
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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