Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0403
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81470-1|CAB03881.1|  321|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical...    29   2.7  
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z75541-6|CAA99857.2|  644|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical...    28   8.3  
AF440800-1|AAL28139.1|  644|Caenorhabditis elegans transcription...    28   8.3  
AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 393 GSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTP 512
           G+  A   T   P     P    +TCP +T  IPT+  TP
Sbjct: 131 GTWSAIGCTSYRPYVCVTPVIMTATCPPITTPIPTTCPTP 170


>Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.6 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 393 GSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTP 512
           G+  A   T   P     P    +TCP +T  IPT+  TP
Sbjct: 131 GTWSAIGCTSYRPYVCVTPVIMTATCPPITTPIPTTCPTP 170


>Z81470-1|CAB03881.1|  321|Caenorhabditis elegans Hypothetical
           protein C14A6.1 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 393 GSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTP 512
           G+  A   T   P     P    +TCP +T  IPT+  TP
Sbjct: 131 GTWSAIGCTSYRPYLCVTPVIMTATCPPITTPIPTTCPTP 170


>AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.31 protein.
          Length = 209

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/74 (24%), Positives = 35/74 (47%)
 Frame = -3

Query: 472 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 293
           GQV  L V   +   S ++  + + + F +  ++P E +   ++V+  +DF G F   ++
Sbjct: 51  GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109

Query: 292 GVDEGLSTREHAHL 251
               G S  E A +
Sbjct: 110 AHFAGKSQEEIAKI 123


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 298 LVGVDEGLSTREHAHLYISMNCLTTSTFMY 209
           L+G+D  L   EH    IS+N L T+TF Y
Sbjct: 406 LLGLDGSLIFLEHVFWVISLNTLFTATFAY 435


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 376 RSPHENIEVLSVVEDSEDFD 317
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical
           protein F37B1.2 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = -3

Query: 487 DLVRSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 308
           D    GQ+  L V   E   S ++  + +   F    ++P E   V +VV+  +DF G F
Sbjct: 46  DKTPMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKDFFGEF 104

Query: 307 HLELVGVDEGLSTRE 263
              ++    G S  E
Sbjct: 105 RKLIIAQRAGKSVEE 119


>Z75541-6|CAA99857.2|  644|Caenorhabditis elegans Hypothetical
           protein F52B5.5a protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 171 IAKEYNIEKSCDKYMNVDVVKQ 236
           +  + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233


>AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.33 protein.
          Length = 209

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/74 (22%), Positives = 34/74 (45%)
 Frame = -3

Query: 472 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 293
           GQV  L+V   +   S ++  + + + F +  ++P E     ++V+  +DF G F   ++
Sbjct: 51  GQVPVLSVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIM 109

Query: 292 GVDEGLSTREHAHL 251
               G    E A +
Sbjct: 110 AQRSGKPAEEIAKI 123


>AF440800-1|AAL28139.1|  644|Caenorhabditis elegans transcription
           factor CEP-1 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 171 IAKEYNIEKSCDKYMNVDVVKQ 236
           +  + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233


>AF077534-3|AAC26290.1|  389|Caenorhabditis elegans Hypothetical
           protein K07D4.6 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 393 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLT 509
           G+TE  S+   T      +TEPT   ST    T ++PTS+ T
Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTST 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,692
Number of Sequences: 27780
Number of extensions: 293601
Number of successful extensions: 710
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)