Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0401
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   4.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  IRKRFYSVIGSDKLPT 136
           +R+   SV+G +K+PT
Sbjct: 22  VREEILSVVGKEKIPT 37


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 632 KNLFCTLSELISLXMYRFVEYPLMPSALLCYIPRRHR 742
           KNL C +       +  F      P+ L CY  RR R
Sbjct: 187 KNLICEIDGRHEFFLAEFKSAKTPPNKLNCYDLRRVR 223



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 779 KGQRXASSXXFWVAEIPSRSFSIHD 853
           + ++ A    +W+ EIP+   SI D
Sbjct: 310 EAEKIAKICFYWLNEIPTMPVSIKD 334


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 655 GADLSXHVPIRGIPIDAV 708
           G  L  H P  G P+D+V
Sbjct: 525 GGTLIVHCPFAGHPVDSV 542


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 462 KRSH*RGRRQHFGSEGAAAVRSVGAHVD 545
           ++SH  GRR+  GSE ++      + V+
Sbjct: 795 QQSHHYGRRERSGSESSSISERCSSRVE 822


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,998
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)