Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0400
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    54   2e-06
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    52   7e-06
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.69 
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    35   1.6  
UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p...    32   8.5  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 41/102 (40%), Positives = 50/102 (49%)
 Frame = -1

Query: 367 LTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRYEAS*ESRIVIFRHYLPRAGSG 188
           LTATIL+Y           TRLALQL   K+   +   Y+      IVI  HYL      
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL------ 367

Query: 187 *FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 62
                  S   +A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 368 -------SYLELAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 52.4 bits (120), Expect = 7e-06
 Identities = 33/74 (44%), Positives = 37/74 (50%)
 Frame = -1

Query: 409 GXPTARRTNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRYEAS*ESR 230
           G P AR  + TTSFLTA  L+Y           TRLALQ  LVK FKV SF+ +      
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 229 IVIFRHYLPRAGSG 188
              F    PR GSG
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -1

Query: 175 LLPSLDVVAVSQAPSPESNPDSP 107
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
          tropicalis|Rep: Novel protein - Xenopus tropicalis
          (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.69
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 47 MSALSTFDGSFCDYHG 94
          MSALSTFDG+FC YHG
Sbjct: 1  MSALSTFDGTFCAYHG 16


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -1

Query: 205 PRAGSG*FARLLPSLDVVAVSQAPSP 128
           P+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 47  PKVSSGKVSRLLLPVDIVAISQAPSP 72



 Score = 34.3 bits (75), Expect = 2.1
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 335 SWNYRGCWHQTCP 297
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 872

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 172 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES**GRHLKD 38
           +PSL  V++SQ   P+  P +PLP    +++E   E   G  + D
Sbjct: 67  IPSLPPVSISQTIKPQIIPQNPLPTMNHIISEPLDEPASGEEMAD 111


>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
           protein sorting protein 36 (ELL-associated protein of 45
           kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Vacuolar protein sorting protein
           36 (ELL-associated protein of 45 kDa), partial -
           Strongylocentrotus purpuratus
          Length = 349

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 110 PVTRDNHGSRRNYHRKLIRQTFERCVA 30
           PVTR+ HGS   YH +L +Q  E  +A
Sbjct: 190 PVTRETHGSGLKYHEELAKQLSEALIA 216


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,896,895
Number of Sequences: 1657284
Number of extensions: 10523095
Number of successful extensions: 26671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26656
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)