Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0399
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   1.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   1.2  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   1.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   1.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   4.7  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   6.2  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.2  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 253 ATGPPSRRLTRKDSFRRRDPREAEGSRREET 345
           A G PSRR TR  +  RR P      R  +T
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYRAGRVGQT 140


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 253 ATGPPSRRLTRKDSFRRRDPREAEGSRREET 345
           A G PSRR TR  +  RR P      R  +T
Sbjct: 110 AGGEPSRRWTRSGATGRRQPHPYRAGRVGQT 140


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 262 PPSRRLTRKDSFRRRDPREAEGSRR 336
           PP   +T K S + R P EAE ++R
Sbjct: 176 PPETPMTGKRSRKARTPEEAEDAKR 200


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 264 GTGSPPARRVSPRTPDRPSTSLGSGFRW 181
           G  SPP R  + R   RP+    +G RW
Sbjct: 219 GESSPPTRDRAARRGQRPARVSKAGTRW 246


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +3

Query: 114 DAVQLVRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVG 254
           D  +LV S  R +V         T I    +  GG       +EP+G
Sbjct: 9   DDTELVNSTIRSEVTCPNHNISGTAIGTTNIQSGGDGVAAAASEPIG 55


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 290 TPSVEEIQEKLKAAEERR 343
           TP++EE++ + + AE+R+
Sbjct: 298 TPAIEELENECRIAEQRQ 315


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 228 RTPDRPSTSLGSGFRWI*FQLPWLPLLTD 142
           RTP +  ++  +GF     + PWLPL TD
Sbjct: 424 RTPFQWDSTANAGFTNASVK-PWLPLATD 451


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 285 SGESARRGT-GSPPARRVSPRTPDRPSTSLGS 193
           SG     G  G+ P+R  +P TP   S S+G+
Sbjct: 173 SGNLGASGVPGAEPSRGSTPPTPGDDSDSMGA 204


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 427 TNNFIVATKEALDAXMETHXEXREXYITSC 516
           TNN      E + A  E   E R+  +T+C
Sbjct: 833 TNNLFRRKDELVQALQEISVEDRKRQLTNC 862


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,791
Number of Sequences: 2352
Number of extensions: 5883
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)