Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0395
(774 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 9e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 7e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 9e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 157 7e-39
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 55 7e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 54 2e-07
SB_54| Best HMM Match : Actin (HMM E-Value=0) 46 3e-05
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 28 9.6
SB_55120| Best HMM Match : DUF854 (HMM E-Value=8.5) 28 9.6
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 9.6
SB_614| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 184 bits (447), Expect = 9e-47
Identities = 102/150 (68%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
ASSSSL + P QVITIG RFR P F LG S H + + ++
Sbjct: 194 ASSSSLEKSYE-LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 252
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI
Sbjct: 253 RK----DLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 308
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 309 LASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (447), Expect = 9e-47
Identities = 102/150 (68%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
ASSSSL + P QVITIG RFR P F LG S H + + ++
Sbjct: 232 ASSSSLEKSYE-LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSI
Sbjct: 291 RK----DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSI 346
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 347 LASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (447), Expect = 9e-47
Identities = 102/150 (68%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
ASSSSL + P QVITIG RFR P F LG S H + + ++
Sbjct: 231 ASSSSLEKSYE-LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSI
Sbjct: 290 RK----DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSI 345
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 LASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (446), Expect = 1e-46
Identities = 102/150 (68%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
ASSSSL + P QVITIG RFR P F LG S H + + ++
Sbjct: 232 ASSSSLEKSYE-LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 290
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI
Sbjct: 291 RK----DLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 346
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 347 LASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 181 bits (440), Expect = 7e-46
Identities = 99/150 (66%), Positives = 111/150 (74%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSF-PTFVLGYGSLRHPRDHI*LHH---EV 534
A+SSS E P QVITIG RFR P P+F+ S H + + ++
Sbjct: 204 AASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDI 263
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSI
Sbjct: 264 RKD----LYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSI 319
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 320 LASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 180 bits (439), Expect = 9e-46
Identities = 100/150 (66%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
A+SSSL + P QVITIG RFR P F LG S H + + ++
Sbjct: 231 AASSSLEKSYE-LPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDI 289
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L ANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSI
Sbjct: 290 RK----DLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 345
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 LASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 157 bits (382), Expect = 7e-39
Identities = 83/150 (55%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Frame = -2
Query: 704 VASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRG 525
+ ++S + E P QVI+IG RFR P F LG + P H +++ + +
Sbjct: 3 IDANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLG---MEAPGIHEAIYNCIMKC 59
Query: 524 HP*---GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
L +N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSI
Sbjct: 60 DVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSI 119
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 120 LASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Frame = -2
Query: 503 NTVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPERKYSV 372
N VLSGG+TM+ R+Q++I + P ++ ++I+ ++Y+V
Sbjct: 245 NIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAV 304
Query: 371 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 264
W GGS+LAS F + +K +YDE GPSI F
Sbjct: 305 WFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = -2
Query: 515 GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILAS 345
GL + +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 344 L 342
L
Sbjct: 230 L 230
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 613 EVLFQPSFWGMEACGIHETTYNSIMKCDVDIRKDL 509
E LFQPS G + GIHE+ + SI KCD+D+R +L
Sbjct: 2304 EPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAEL 2338
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = -2
Query: 593 VLGYGSLRHPRDHI*LHHEVRRGHP*GLDANTVLSGGTTMYPGIADRMQKEITA-LAPST 417
VL GS +P L E+++ L VL G T+ Q +TA
Sbjct: 302 VLSGGSTMYPGLPSRLEREIKQ-----LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQK 356
Query: 416 MKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 291
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 357 FKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 616 PEVLFQPSFWGMEACGIHETTYNSIMKCDVDIRKD 512
PE LFQP +E G+ E +N+I D+D R +
Sbjct: 262 PEALFQPHLINVEGVGVAELLFNTIQAADIDTRSE 296
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = -2
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 360
L N VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 359 SILASLSTFQQMWISKQEYDE 297
+I SL +++ Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 616 PEVLFQPSFWGMEACGIHET 557
PE++FQPS G+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAP 423
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 440 FPFAYGRRFQGTWWYHRTIRCWRQVLTDVHVA--LHDGVICGLVDAAS 577
FP RF+ + +R ++ W VLTD +A L V+ GL+ A+S
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQASS 49
>SB_55120| Best HMM Match : DUF854 (HMM E-Value=8.5)
Length = 327
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 440 FPFAYGRRFQGTWWYHRTIRCWRQVLTDVHVA--LHDGVICGLVDAAS 577
FP RF+ + +R ++ W VLTD +A L V+ GL+ A+S
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQASS 49
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = +1
Query: 355 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRS--AIP-----GYMVVPPDNTVLASS 513
+DPP+ +Y L+GG ++ + FCI +P +V PD + ASS
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQGFVVPTPPECNSAIVLPDARITASS 817
Query: 514 PYGCPRRTS 540
R S
Sbjct: 818 EANSAHRAS 826
>SB_614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 440 FPFAYGRRFQGTWWYHRTIRCWRQVLTDVHVA--LHDGVICGLVDAAS 577
FP RF+ + +R ++ W VLTD +A L V+ GL+ A+S
Sbjct: 2 FPIEQLARFEASNSAYRLLKPWWDVLTDYLIAAMLVVAVLAGLMQASS 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,294,471
Number of Sequences: 59808
Number of extensions: 507471
Number of successful extensions: 1359
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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