Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0395
(774 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 173 1e-43
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 170 1e-42
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 169 2e-42
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 169 2e-42
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 167 9e-42
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 167 9e-42
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 165 4e-41
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 165 4e-41
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 154 5e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 146 1e-35
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 123 1e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 122 3e-28
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 4e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 88 5e-18
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 65 6e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 62 5e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 4e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 2e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 6e-04
At5g43500.2 68418.m05318 expressed protein 31 0.64
At5g43500.1 68418.m05319 expressed protein 31 0.64
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 31 0.64
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.5
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.5
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 2.6
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 29 2.6
At4g10290.1 68417.m01692 hypothetical protein 29 3.4
At1g09190.1 68414.m01026 pentatricopeptide (PPR) repeat-containi... 28 6.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 173 bits (421), Expect = 1e-43
Identities = 93/149 (62%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRGH 522
A SSS E P QVITIG RFR P F ++G + P H ++ + +
Sbjct: 232 AKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIG---MEAPGIHETTYNSIMKCD 288
Query: 521 P*---GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 351
L N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 350 ASLSTFQQMWISKQEYDESGPSIVHRKCF 264
ASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 349 ASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 170 bits (413), Expect = 1e-42
Identities = 92/150 (61%), Positives = 107/150 (71%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDHI*LHH---EV 534
A++SS E P QVITIG RFR P F ++G + H + + ++
Sbjct: 232 ANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDI 291
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSI
Sbjct: 292 RKD----LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 348 LASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 169 bits (410), Expect = 2e-42
Identities = 90/149 (60%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRGH 522
A +SS E P QVITIG RFR P + ++G + + H ++ + +
Sbjct: 232 AKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIG---MENAGIHETTYNSIMKCD 288
Query: 521 P*---GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 351
L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 350 ASLSTFQQMWISKQEYDESGPSIVHRKCF 264
ASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 349 ASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 2e-42
Identities = 90/149 (60%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRGH 522
A +SS E P QVITIG RFR P + ++G + + H ++ + +
Sbjct: 232 AKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIG---MENAGIHETTYNSIMKCD 288
Query: 521 P*---GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 351
L N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 350 ASLSTFQQMWISKQEYDESGPSIVHRKCF 264
ASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 349 ASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 167 bits (405), Expect = 9e-42
Identities = 89/148 (60%), Positives = 105/148 (70%), Gaps = 3/148 (2%)
Frame = -2
Query: 698 SSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRR--- 528
+SSS+ + P QVITIG RFR P F ++G + +P H ++ + +
Sbjct: 234 TSSSVEKSFE-LPDGQVITIGAERFRCPEVLFQPSMIG---MENPGIHETTYNSIMKCDV 289
Query: 527 GHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
L N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 347 SLSTFQQMWISKQEYDESGPSIVHRKCF 264
SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 167 bits (405), Expect = 9e-42
Identities = 89/148 (60%), Positives = 105/148 (70%), Gaps = 3/148 (2%)
Frame = -2
Query: 698 SSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRR--- 528
+SSS+ + P QVITIG RFR P F ++G + +P H ++ + +
Sbjct: 234 TSSSVEKSFE-LPDGQVITIGAERFRCPEVLFQPSMIG---MENPGIHETTYNSIMKCDV 289
Query: 527 GHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 348
L N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 347 SLSTFQQMWISKQEYDESGPSIVHRKCF 264
SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 165 bits (400), Expect = 4e-41
Identities = 91/150 (60%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSF-PTFVLGYGSLRHPRDHI*LHH---EV 534
+ +SS E P QVITIG RFR P F P+FV + H + + ++
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSI
Sbjct: 292 RKD----LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 348 LASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 165 bits (400), Expect = 4e-41
Identities = 91/150 (60%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSF-PTFVLGYGSLRHPRDHI*LHH---EV 534
+ +SS E P QVITIG RFR P F P+FV + H + + ++
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSI
Sbjct: 292 RKD----LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 348 LASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 154 bits (374), Expect = 5e-38
Identities = 83/150 (55%), Positives = 102/150 (68%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDHI*LHH---EV 534
A++SS + P QVITIG RFR P F T ++G + H + + ++
Sbjct: 233 ATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDI 292
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSI
Sbjct: 293 RKD----LYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSI 348
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLS+F MWI+K EYDE G +IVHRKCF
Sbjct: 349 LASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = -3
Query: 619 CPEVLFQPSFWGMEACGIHETTYNSIMKCDVDIRKDL 509
CPEVLFQ S GME GIHETTYNSIMKCDVDIRKDL
Sbjct: 260 CPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDL 296
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 146 bits (355), Expect = 1e-35
Identities = 79/150 (52%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLR-HPRDH---I*LHHEV 534
A+ SS + P QVITIG RFR P F ++G + H + + + ++
Sbjct: 184 ATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDI 243
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSI
Sbjct: 244 RKD----LYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSI 299
Query: 353 LASLSTFQQMWISKQEYDESGPSIVHRKCF 264
LASLST++QMWI+K EY+E+GP+IVH KCF
Sbjct: 300 LASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 123 bits (297), Expect = 1e-28
Identities = 74/134 (55%), Positives = 89/134 (66%), Gaps = 4/134 (2%)
Frame = -2
Query: 701 ASSSSLREVLRTFPTVQVITIGXRRFRLPRGSF-PTFVLGYGSLRHPRDHI*LHH---EV 534
+ +SS E P QVITIG RFR P F P+FV + H + + ++
Sbjct: 232 SKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDI 291
Query: 533 RRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI 354
R+ L N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSI
Sbjct: 292 RKD----LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI 347
Query: 353 LASLSTFQQMWISK 312
LASLSTFQQ+ I +
Sbjct: 348 LASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 122 bits (294), Expect = 3e-28
Identities = 66/134 (49%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = -2
Query: 662 PTVQVITIGXRRFRLPRGSFPTFVLGYGS--LRHPRDHI*LHHEVRRGHP*GLDANTVLS 489
P Q ITI RF P F V+G S + + L V + N +++
Sbjct: 234 PDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD--MYGNILMT 291
Query: 488 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 309
GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K
Sbjct: 292 GGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKD 351
Query: 308 EYDESGPSIVHRKC 267
EY+E G +IVHRKC
Sbjct: 352 EYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/85 (45%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = -2
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASL 342
L ++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL
Sbjct: 356 LYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASL 415
Query: 341 STFQQMWISKQEYDESGPSIVHRKC 267
+FQQMW SK EY+E G S + RKC
Sbjct: 416 GSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 88.2 bits (209), Expect = 5e-18
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Frame = -2
Query: 668 TFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRGHP*GLDANTVLS 489
T P QVI+IG R+ + F +LG + + V + L NTVL
Sbjct: 224 TLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLC 283
Query: 488 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQ 327
GGTT G R QKE L S ++ ++ PPE YS W+GG+ILA + Q
Sbjct: 284 GGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQN 342
Query: 326 MWISKQEYDESGPSIVHRKCF 264
++K +YDE+GPS+VHRKCF
Sbjct: 343 QHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = -2
Query: 497 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 318
+L+GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M +
Sbjct: 343 ILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCV 402
Query: 317 SKQEYDESGPSIVHRKCF 264
+K EY+E G + R+ F
Sbjct: 403 TKAEYEELGSARCRRRFF 420
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 616 PEVLFQPSFWGMEACGIHETTYNSIMKC 533
PE LFQP+ GM G+ E +I C
Sbjct: 303 PETLFQPADLGMNQAGLAECIVRAINSC 330
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 61.7 bits (143), Expect = 5e-10
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Frame = -2
Query: 668 TFPTVQVITIGXRRFRLPRGSFPTFVLGYGSLRHPRDHI*LHHEVRRGHP*GLDANTVLS 489
T P +VI +G RF+ P F ++ E+ + L + VLS
Sbjct: 242 TLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLS 301
Query: 488 GGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSILAS- 345
GG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++LA
Sbjct: 302 GGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGI 361
Query: 344 LSTFQQMWISKQEYDESGPSIVHR 273
+ + WI++++Y E G + +++
Sbjct: 362 MKDAPEFWINREDYMEEGINCLNK 385
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Frame = -2
Query: 503 NTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERKYSV 372
N VLSGG+TM+ R+Q+++ + + + ++ +++ P ++++V
Sbjct: 327 NIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAV 386
Query: 371 WIGGSILASLSTFQQMWISKQEYDESGPSI 282
W GGS+L+S F +K+EY+E G SI
Sbjct: 387 WFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -2
Query: 497 VLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQM 324
VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 323 W-ISKQEY 303
W I+++++
Sbjct: 456 WCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = -2
Query: 512 LDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 333
L ++ +++GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 637 LTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
Query: 332 QQMWISKQEYDESG 291
+K +YDE G
Sbjct: 697 LGNAFTKMDYDEKG 710
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 619 CPEVLFQPSFWGMEACGIHETTYNSIMKCDVD 524
CPE+LF P+ G++ G+ E SI + D
Sbjct: 598 CPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -2
Query: 494 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 327
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 488 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 547
Query: 326 MWISKQEYDESG 291
WI + ++ +G
Sbjct: 548 AWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -2
Query: 494 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 327
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 500 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 559
Query: 326 MWISKQEYDESG 291
WI + ++ +G
Sbjct: 560 AWIERHQWMVNG 571
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 491
P GV+PL NDL+ WG S F + +H T G
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLHRATLG 232
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 360 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGGTTGQYGVGVKSL 518
S DP GVL W HC W G +CD H V S + G + +L
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANL 95
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 366 DPYGVLPLWRSNDLNLHCRW-GESCD 440
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -2
Query: 548 LHHEVRRGHP*GLDANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 375
++ E+ HP L G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 369 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 491
P GV+PL NDL+ WG S F + +H + G
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLHRASMG 229
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 504 GVKSLRMSTSHFMMELYVVSWMPQASIPQNEGWKRTSGQT 623
GVK +R ++ + EL V SW S+P+ WK +T
Sbjct: 19 GVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTET 58
>At1g09190.1 68414.m01026 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 999
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 714 WPTGCIXQFPSRSFTNFPDGPGHHYRKXKIPFAQRFFSNLRS-GVW 580
+PTGC+ + P GH + P + FFS+++S G+W
Sbjct: 570 FPTGCVHLGYKQMLKRLPSNQGHLHMTAG-PKSLSFFSSMKSRGIW 614
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,277,513
Number of Sequences: 28952
Number of extensions: 347214
Number of successful extensions: 932
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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