Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0392
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.96 
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    24   0.96 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   1.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   1.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.9  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 69 YCHENTNNC 43
          YCHEN N+C
Sbjct: 64 YCHENINDC 72


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 94  ILGIFPSLDRTNYLTYRDLFKE 159
           ILG++P +    Y   RD+F++
Sbjct: 11  ILGVYPEIQEKVYQELRDIFQD 32


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 37  KRTIVCIFVTIILTTDCYKILGIFPSLDRTNYLTY 141
           K  ++ I V+ I   D Y I G+  ++D  N +TY
Sbjct: 170 KGHLLTIAVSAIPIDDAYDIPGMSENVDVINLMTY 204


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 171 KQRCDPDQPL 200
           ++RCDPD+PL
Sbjct: 182 EERCDPDRPL 191


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 461 GKFEXAVHSIEPEAYTPWH 517
           G ++ ++H    + YTPWH
Sbjct: 470 GPWKPSMHGGVCDPYTPWH 488


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 115 LDRTNYLTYRDLFKELANRNNDVTLISHFPMSDAPASYRDILL 243
           LD    LT   + KE+A     V    H P S+  + +  +LL
Sbjct: 250 LDSFMALTVMQVLKEMAMTGKTVICTIHQPSSEVYSMFDKLLL 292



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  VCIFVTIILTTDCYKILGI 105
           + I + +ILT+ CY ++G+
Sbjct: 501 IFIIIPVILTSVCYFMIGL 519


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 115 LDRTNYLTYRDLFKELANRNNDVTLISHFPMSDAPASYRDILL 243
           LD    LT   + KE+A     V    H P S+  + +  +LL
Sbjct: 250 LDSFMALTVMQVLKEMAMTGKTVICTIHQPSSEVYSMFDKLLL 292


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 320 CFKGHSRHFTG 288
           C KG+++H+TG
Sbjct: 187 CLKGNAKHWTG 197


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 25  INMTKRTIVCIFVTIILTTDCYKIL 99
           I+ TK  +  +  TI+    CY +L
Sbjct: 58  ISETKSIVAMVMGTIVNAFSCYTVL 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,765
Number of Sequences: 336
Number of extensions: 3085
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)