Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0392
         (658 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58589| Best HMM Match : ATP-cone (HMM E-Value=2.2)                  29   4.4  
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_943| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   5.8  
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.7  

>SB_58589| Best HMM Match : ATP-cone (HMM E-Value=2.2)
          Length = 360

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 70  ILTTDCYKI-LGIFPSLDRTNYLTYRDLFKELANRNNDVTL 189
           +L  +C  I + + P   R++YL    L +ELA+R ++V++
Sbjct: 13  VLACECSGIKIAMMPQFGRSHYLVMSKLAEELASRGHEVSV 53


>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1616

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 103 IFPSLDRTNYLTYRDLFKELANRNNDVTLISHFPMSDAPASYRDI 237
           +F  L+R    ++ ++FK + NR N+V  I    + +A     DI
Sbjct: 811 LFSKLERIGKGSFGEVFKGIDNRTNEVVAIKIIDLEEAEDEIEDI 855


>SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 556

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +1

Query: 79  TDCYKILGIFPSLDRTNYLTYRDLFKELANRNNDVTLI 192
           +D  KI+G +P +  + Y+  R + +ELA R ++VTL+
Sbjct: 4   SDAAKIVG-YPMMAGSPYIGMRRIAQELAARGHEVTLL 40


>SB_943| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 628

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 55  IFVTIILTTDCYKILGIFPSLDRTNYLTYRDLFKELANRNNDVTLIS 195
           +F+T++L   C K     P+L     LT+R  F  L +  +D+ L+S
Sbjct: 24  LFLTLLLKLPCSKYHVSCPALLPETTLTFRSSFCRLLSGYSDIKLLS 70


>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 911

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 90  ITVSC*YYCHENTNNCAFCHID 25
           +T  C YYCH + N  A CH D
Sbjct: 518 MTTRCFYYCHRHHNPLA-CHFD 538


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,538,419
Number of Sequences: 59808
Number of extensions: 395121
Number of successful extensions: 887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)