Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0392
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   4.5  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   4.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   4.5  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   4.5  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   4.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   4.5  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   4.5  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   4.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.5  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.8  

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSYHDEKFKQLRNEDNKIDLRS 29


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSHHDEKFKQLRNEDNKIDLRS 29


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 124 TNYLTYRDLFKELANRNNDVTLIS 195
           +NY  + + FK+L N +N + L S
Sbjct: 6   SNYSYHDEKFKQLRNEDNKIDLRS 29


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 408 YDVVLVESFNSDCGIALA 461
           Y  ++V+  N DCG A+A
Sbjct: 308 YTNIVVDIRNEDCGSAIA 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,358
Number of Sequences: 438
Number of extensions: 3738
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)