Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0391
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 86 8e-16
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 85 1e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 85 1e-15
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 4e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 2e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 3e-12
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 74 3e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 74 3e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 4e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 4e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 6e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 73 8e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 73 8e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 8e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 72 1e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 71 2e-11
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 70 4e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 70 5e-11
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 68 2e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 67 3e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 65 1e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 65 2e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 64 2e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 2e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 2e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 2e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 64 3e-09
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 62 8e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 62 8e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 61 3e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 2e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 57 4e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 54 4e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 51 2e-05
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 51 3e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 50 5e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 49 8e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 48 1e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 46 8e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 45 0.002
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 41 0.022
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.029
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 41 0.029
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.088
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 39 0.12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 38 0.20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 38 0.27
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 36 0.82
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 35 1.4
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.4
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 5.8
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 33 7.7
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 33 7.7
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 85.8 bits (203), Expect = 8e-16
Identities = 48/93 (51%), Positives = 55/93 (59%)
Frame = -2
Query: 302 KGGG*ESKSYIIYSWEAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 123
K GG + A+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 122 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 24
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -3
Query: 445 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 266
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 265 IRG 257
IRG
Sbjct: 138 IRG 140
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -1
Query: 639 GSKMRYLSFRPVNNMVIAPAKXGRDNNNKNAVTPTAHTNXGN*SM 505
GSK FR V ++VIAPA G ++N+K AV+ T TN G SM
Sbjct: 13 GSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 91 FPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 150
Query: 435 GIS 443
GIS
Sbjct: 151 GIS 153
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 9 HKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVM 68
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL+LGAPD+A
Sbjct: 69 PIMIGGFGNWLVPLMLGAPDMA 90
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +2
Query: 509 DQLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
DQ+P FV AVG+TAF AGAIT+LLT R L FD
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFD 218
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 67 FPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 126
Query: 435 GIS 443
GIS
Sbjct: 127 GIS 129
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = +1
Query: 94 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 255
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+A
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMA 66
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 509 DQLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
DQ+P F+ AVG+TA AGAIT+LLT R L FD
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFD 194
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLA
Sbjct: 77 FPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLA 136
Query: 435 GIS 443
G+S
Sbjct: 137 GVS 139
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +1
Query: 94 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 255
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+A
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMA 76
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLA
Sbjct: 95 FPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLA 154
Query: 435 GIS 443
GIS
Sbjct: 155 GIS 157
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 13 HKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVM 72
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL++GAPD+A
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMA 94
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLA
Sbjct: 95 FPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLA 154
Query: 435 GIS 443
G+S
Sbjct: 155 GLS 157
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/99 (35%), Positives = 45/99 (45%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 13 HKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVM 72
Query: 190 XXXXXXXXN*LVPLILGAPDIASHE*II*DFDSYPPPLY 306
N VPL++GAPD+A F PP L+
Sbjct: 73 PTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 83 FPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 142
Query: 435 GIS 443
GIS
Sbjct: 143 GIS 145
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N L+PL++GAPD+A
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMA 82
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 435 GIS 443
G+S
Sbjct: 154 GVS 156
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL++GAPD+A
Sbjct: 72 PVMIGGFGNWLVPLMIGAPDMA 93
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 435 GIS 443
G+S
Sbjct: 154 GVS 156
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL++GAPD+A
Sbjct: 72 PILIGGFGNWLVPLMIGAPDMA 93
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 73.3 bits (172), Expect = 4e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 435 GIS 443
IS
Sbjct: 155 SIS 157
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 73.3 bits (172), Expect = 4e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 435 GIS 443
IS
Sbjct: 155 SIS 157
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLA 153
Query: 435 GIS 443
G+S
Sbjct: 154 GVS 156
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 12 HKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVM 71
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL++GAPD+A
Sbjct: 72 PIMIGGFGNWLVPLMIGAPDMA 93
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 435 GIS 443
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N LVP+++GAPD+A
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMA 93
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 506 IDQLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
+ +LP FV A+ VTA AGAIT+LLT R +D
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYD 221
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 435 GIS 443
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N LVP+++GAPD+A
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMA 93
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 506 IDQLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
+ +LP FV A+ VTA AGAIT+LLT R +D
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYD 221
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 435 GIS 443
GIS
Sbjct: 154 GIS 156
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N LVP+++GAPD+A
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMA 93
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 95 FPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLT 154
Query: 435 GIS 443
IS
Sbjct: 155 SIS 157
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 95 FPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMT 154
Query: 435 GIS 443
IS
Sbjct: 155 SIS 157
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+
Sbjct: 97 FPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLS 156
Query: 435 GIS 443
G+S
Sbjct: 157 GVS 159
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 183
H+DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 13 HKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFM 72
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N VP+++GAPD+A
Sbjct: 73 VMPAMIGGFGNWFVPILIGAPDMA 96
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2
Query: 512 QLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
+LP FV +V VTAF AGAIT+LLT R FD
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFD 224
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 69.7 bits (163), Expect = 5e-11
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 435 GI 440
G+
Sbjct: 73 GV 74
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 512 QLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
++P FV AV +TA AGAIT+LLT R + FD
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFD 140
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++
Sbjct: 102 FPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHIS 161
Query: 435 GIS 443
G S
Sbjct: 162 GAS 164
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 183
H+DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 18 HKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFM 77
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N LVP+++G+PD+A
Sbjct: 78 VMPVMIGGFGNWLVPIMIGSPDMA 101
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 512 QLPXFV*AVGVTAFXXXXXXXXXAGAITILLTGRKLKYLIFD 637
++P FV ++ VTAF AGAIT+LLT R FD
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFD 229
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 435 GIS 443
GIS
Sbjct: 155 GIS 157
Score = 44.0 bits (99), Expect = 0.003
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 189
+DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 190 XXXXXXXXN*LVPLILGAPDI 252
N L+PL LG PD+
Sbjct: 73 PALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 422
FPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 10 FPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+
Sbjct: 121 FPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLS 180
Query: 435 GIS 443
GIS
Sbjct: 181 GIS 183
Score = 39.9 bits (89), Expect = 0.051
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 189
+DI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N L+P+++G PD+A
Sbjct: 99 PALIGGFGNFLLPILIGGPDMA 120
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 435 GIS 443
G+S
Sbjct: 172 GLS 174
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 435 GIS 443
G+S
Sbjct: 172 GLS 174
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 435 GIS 443
G+S
Sbjct: 172 GLS 174
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 435 GIS 443
G+S
Sbjct: 172 GLS 174
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLA
Sbjct: 78 FPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLA 137
Query: 435 GIS 443
G S
Sbjct: 138 GAS 140
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +1
Query: 94 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMS 77
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 62.5 bits (145), Expect = 8e-09
Identities = 32/62 (51%), Positives = 34/62 (54%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 98 FPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLV 157
Query: 435 GI 440
GI
Sbjct: 158 GI 159
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 183
H+ IG LY EL PG L G+ YN I T H
Sbjct: 14 HKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVV 73
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N VP+++GAPD++
Sbjct: 74 VMPILFGGFGNYFVPILIGAPDMS 97
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 62.5 bits (145), Expect = 8e-09
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFS 422
FPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+
Sbjct: 123 FPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFA 182
Query: 423 LHLAGIS 443
LHL+G+S
Sbjct: 183 LHLSGVS 189
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 189
+DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N L+PL++G PD+A
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMA 122
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
F R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+
Sbjct: 100 FARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLS 159
Query: 435 GIS 443
G S
Sbjct: 160 GFS 162
Score = 38.7 bits (86), Expect = 0.12
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N L+PL+LGA D+A
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMA 99
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 189
H+D GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 13 HKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXM 72
Query: 190 XXXXXXXXN*LVPLILGAPDIA 255
N LVPL++GAPD+A
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMA 94
Score = 39.1 bits (87), Expect = 0.088
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 374
FPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 95 FPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +3
Query: 324 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 443
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +1
Query: 94 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 255
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+A
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMA 77
Score = 33.9 bits (74), Expect = 3.3
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F + G + PL G SVDLAIF LHLA
Sbjct: 78 FPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLA 135
Query: 435 GIS 443
G+S
Sbjct: 136 GVS 138
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++
Sbjct: 200 FPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVS 259
Query: 435 GIS 443
G S
Sbjct: 260 GAS 262
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +3
Query: 258 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 437
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 438 IS 443
IS
Sbjct: 145 IS 146
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 422
FPR+NNI F V NGAGTG TVY PLS++ G +VD+AI S
Sbjct: 134 FPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILS 192
Query: 423 LHLAGIS 443
LH+AG S
Sbjct: 193 LHIAGAS 199
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 258 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 437
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 438 IS 443
+S
Sbjct: 157 MS 158
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +1
Query: 4 IRHEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 183
+ H+DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 12 VNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFF 71
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N +PL++ D++
Sbjct: 72 VMPTSIGGLGNWFIPLMIKIKDLS 95
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 49.2 bits (112), Expect = 8e-05
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 HEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 183
H+DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 14 HKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFM 73
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N VP+++G+PD+A
Sbjct: 74 VMPAMIGGFGNWFVPILIGSPDMA 97
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N LVP+++GAPD+A
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMA 93
Score = 32.7 bits (71), Expect = 7.7
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 383
FPR+NNI F VE GAGTG TV LS I
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 366 PLSSNIAHRGRSVDLAIFSLHLAGIS 443
PL+S+IAH G SVD+AIFSLHLAG+S
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVS 97
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 435 GIS 443
GIS
Sbjct: 157 GIS 159
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 41.1 bits (92), Expect = 0.022
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 IRHEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 177
+ H+ IGT Y EL +PG G Q+YN+++T H
Sbjct: 19 VNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIF 78
Query: 178 XXXXXXXXXXXXN*LVPLILGAPDIA 255
N ++PL+LGAP++A
Sbjct: 79 FLVMPILIGGFGNWMLPLMLGAPEMA 104
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
FPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 105 FPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTV 163
Query: 435 GI 440
GI
Sbjct: 164 GI 165
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 434
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 435 GIS 443
GI+
Sbjct: 160 GIA 162
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHL 431
+PRIN+I E G GTG T+YPPLS+++ +VD+ IF L +
Sbjct: 99 YPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLV 158
Query: 432 AGIS 443
+G++
Sbjct: 159 SGVA 162
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.088
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 257 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 427
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 38.7 bits (86), Expect = 0.12
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 EDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 186
+DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 187 XXXXXXXXXN*LVPLILGAPDIA 255
N L+PL+LGA D+A
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMA 99
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 37.9 bits (84), Expect = 0.20
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +1
Query: 4 IRHEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 183
+ H+DIG LY EL +PG + + YN+++T+H
Sbjct: 92 VDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFL 150
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N L+PL++GA D+A
Sbjct: 151 FATPIIAAFSNYLIPLLIGADDMA 174
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 37.5 bits (83), Expect = 0.27
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +3
Query: 336 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 443
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 35.9 bits (79), Expect = 0.82
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 3 NSARGYWNIIFYFWYLIRNNWNIFKTFNS 89
N ++ YWNI+F+FWYLI ++ K NS
Sbjct: 343 NKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 339 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 443
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIA 142
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 258 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 431
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 432 AGIS 443
GIS
Sbjct: 165 LGIS 168
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 33.1 bits (72), Expect = 5.8
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 431
FPR+N F G AG G T Y PLS+N+ G L + ++ +
Sbjct: 126 FPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFV 185
Query: 432 AGIS 443
G+S
Sbjct: 186 TGVS 189
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 32.7 bits (71), Expect = 7.7
Identities = 21/84 (25%), Positives = 29/84 (34%)
Frame = +1
Query: 4 IRHEDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 183
+ H+ IG ++ EL PG I D YN T H
Sbjct: 40 VDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLF 99
Query: 184 XXXXXXXXXXN*LVPLILGAPDIA 255
N ++PL+LGA D+A
Sbjct: 100 MIPAIPAVFGNFMLPLMLGAKDVA 123
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 32.7 bits (71), Expect = 7.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 FPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 431
FPR+N + + E+GA G T+Y PL++ I G +DLA ++ L
Sbjct: 102 FPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFL 161
Query: 432 AGIS 443
+S
Sbjct: 162 FSLS 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,202,216
Number of Sequences: 1657284
Number of extensions: 7245867
Number of successful extensions: 13601
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 13091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13556
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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