Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0388
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.90
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 29 1.2
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 29 1.2
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces... 28 1.6
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 2.1
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 2.7
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 27 3.6
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 4.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.8
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 27 4.8
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 4.8
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 27 4.8
SPBP8B7.24c |atg8||autophagy associated protein Atg8 |Schizosacc... 26 6.3
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 26 6.3
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 6.3
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 8.4
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 26 8.4
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 29.1 bits (62), Expect = 0.90
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -3
Query: 387 NDALHNR--LSTFVDGIEY-LSEELDYFVESMR*FLQSLIISDFLVKLLHSLRKSSSIFL 217
+DA N LSTF G+EY +S L + ++ F I++ VK ++ LRK+ SIF
Sbjct: 82 DDASKNNTFLSTFDPGVEYRVSIGLMLLLSALIGFCSESIVTS--VKSVYKLRKAHSIFS 139
Query: 216 K 214
K
Sbjct: 140 K 140
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 232 RLPQRMEQFYQEVTDDKTLKELSHAFNEIVQFFAKIFDTIYKGTEPIVESIINTYVETVK 411
+L E ++ + +K + N+I++ F ++D I P V ++ YVET+
Sbjct: 424 KLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDIIKAKLPPNVAEKVDYYVETII 483
Query: 412 KIAEL 426
+ E+
Sbjct: 484 ETPEI 488
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Frame = +1
Query: 232 RLPQRMEQFYQEVTDDKTLKELSHAFNEIVQFF----AKIFDTIYKGTEPIVESIINT-- 393
RL ++ Q + V TLKE+S+ ++Q K+ D++ G + + +NT
Sbjct: 1573 RLMIQLLQIFILVLMRVTLKEISNKDKLLLQSIFLLSRKLQDSVQTGADQALSPEMNTVK 1632
Query: 394 -YVETVKKIAELY 429
YVET+ ++ +LY
Sbjct: 1633 KYVETISRLLDLY 1645
>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 74 YGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDF 238
YG+S N F + L+N + L+ +K++ + E S ++ + KK +E F
Sbjct: 214 YGISLPNLGIFTHILRNSRNDLSNYLKKRPYREVIESSLYNRNVSVACKKKNEAF 268
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 77 GLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 235
G S+E+ + F+ L+ +LD + K KS + + I ++T +++D D
Sbjct: 37 GWSEEDESDFVELLEKELDKVYSFQKNKSAEVMERIRFCEEQTDEVVRRLDSD 89
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 280 KTLKELSHAFNEIVQFFAKIFDTIYKGT-EPIVESIINTYVETV 408
K +++ +AF+ + A D +YKGT EP+++S++ Y TV
Sbjct: 88 KRFRDVRYAFDRLFGEEASQED-VYKGTTEPLLDSVLQGYNATV 130
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 149 IKEKSEKAGQEISTISQKTAPYFKKIDEDFR 241
+KEK ++ + + + +KT P KK +ED +
Sbjct: 152 MKEKDNESDKTMKDVEEKTEPSLKKEEEDIQ 182
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +2
Query: 71 DYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREW 250
D L N L + L E ++E TIS+K P+ K+I ++ EW
Sbjct: 254 DRSLPALNIQRSLMDILTKLPIQTEHLRESKIGRIVLFYTISKKPEPFIKRIADNLVSEW 313
Query: 251 S 253
S
Sbjct: 314 S 314
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 NALKNDLDTLAERIKEKSEKAGQEI-STISQKTAPYFKKIDEDFRR 244
+++K+DL + +R+KE+ E E+ S I+ +T F+ + + +
Sbjct: 519 SSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEK 564
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 447 GFELYXI*FRNLFHCLDVRVN-DALHNRLSTFVDGIEYLSEELDYFVES 304
GF + ++N+F ++V+ N + TF I+Y+ E D+ VES
Sbjct: 337 GFHICRWGYKNVFDLVEVKENFKNFEIPVDTFWSDIDYMYEYRDFTVES 385
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 116 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDEDFRREWSSFTRKSLMI 280
L ND+D E I+EK E E S + + F+ D+D + + S K L I
Sbjct: 74 LINDIDDDNEIIEEKKETEKVEESELEPRYTRVFRDEDDDQKHQLDSEAIKLLDI 128
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 665 SALLEKEVPLLEPQLFGLDFEYIGDHIRELLQFRLVFFE 549
S LL ++PL+ +FG E I E + R FF+
Sbjct: 813 SELLTDKIPLVLDAVFGCTLEMISKDFSEYPEHRAAFFQ 851
>SPBP8B7.24c |atg8||autophagy associated protein Atg8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +3
Query: 486 QGVFRWLDDLVAHFAALITDFFEKHKPE 569
+ +F ++D+++ AAL++ +E+HK E
Sbjct: 74 KAIFIFIDEILPPTAALMSTIYEEHKSE 101
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 509 VKPSKYSLSKAAKVSYNCLTWGSSCXXYNSAIFFTVSTYV 390
V + Y++ A S NC T S YN IF + Y+
Sbjct: 216 VNTTTYAVYDGADTSTNCTTLDPSQWSYNIGIFMVGAAYM 255
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 536 QSREVRHEVVKPSKYSLSKAAKVSYNCLTWGSSCXXYNSAIF 411
Q + + H +KP LS K + +GSSC YN ++
Sbjct: 636 QGQNIIHCDLKPENLLLSHPLKARIKLIDFGSSC-FYNEKVY 676
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 116 LKNDLDTLAERIKEKSEKAGQEISTISQKTAPYF---KKIDEDFRREWS 253
LKND + E+ KS G ++ + P F ++IDE + W+
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTENSKDEFNNPLFETEEQIDESWMENWN 622
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 EVTDDKTLKELSHAFNEIVQFFAKIFDTIYKGTEPIVESII-NTYVETVKKIAELYXIQL 441
E+ K + +SH N Q A ++ + + +++SII N ++ K+ E + L
Sbjct: 534 ELVYQKFQRSVSHIINTYKQEGATMYADVLQDEVDLLKSIIENQVLDAQNKVDEFTPV-L 592
Query: 442 EPQVRQLYETLAALLKE 492
E +R ++ ++LLKE
Sbjct: 593 ESLLRSSFKA-SSLLKE 608
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,438,962
Number of Sequences: 5004
Number of extensions: 68535
Number of successful extensions: 253
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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