Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0388
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.14 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   7.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 56   NLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKIDED 235
            ++ K  Y +    +   L ++K  L+      K+KS K         +K A Y K++DE 
Sbjct: 969  DVFKLHYKVQNNKYVLKLKSMKGPLNNSLTEQKQKSYKQIDASGEAVEKKAQYKKEVDEK 1028

Query: 236  FRRE 247
            F  E
Sbjct: 1029 FAEE 1032


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -2

Query: 634  LSHNYSG*TLNISVITFVNSCSSGLCFSKKSVIRAAKCATRSSSHLNTP*VRPPRF 467
            LS+ +   T NIS IT  +  SS        ++  A CA  +SS++ TP +RP  +
Sbjct: 3099 LSYVFPHNTSNISGIT-EDHYSSCYPIEYNGLLTTA-CAGTNSSYMYTPYIRPVNY 3152


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 572 ARVHECDHRYIQSLTRIIVAQVKELPSLI 658
           A++H CD+R    L R +V  V ++  L+
Sbjct: 808 AKLHYCDYRGNTPLHRAVVENVPDMVRLL 836


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 199  KNSSLLQENR*RLPQRMEQFYQEVTDDKTLKELSHAFNEIVQFFAKIFDTIYKGTEPIVE 378
            K  +LL  N  R    + Q  QE++ +   ++L++  NE+V    +I   +   TE +  
Sbjct: 827  KLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRI-KKVLTDTEEVDR 885

Query: 379  SIINTYVE--TVKKIAELYXIQLEPQVRQLYE 468
             +     +  T++K  E + IQ E + ++  E
Sbjct: 886  KLSEALKQQKTLQKELESW-IQKEKEAQEKLE 916


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,314
Number of Sequences: 2352
Number of extensions: 16044
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)