BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0388
(896 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA... 34 0.30
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 30 4.9
AY069624-1|AAL39769.1| 835|Drosophila melanogaster LD39455p pro... 29 6.5
AE014297-4301|AAF56841.1| 835|Drosophila melanogaster CG1951-PA... 29 6.5
BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p pro... 29 8.6
AY060387-1|AAL25426.1| 421|Drosophila melanogaster LD29155p pro... 29 8.6
AE014297-1910|AAS65154.1| 421|Drosophila melanogaster CG3631-PC... 29 8.6
AE014297-1909|AAN13620.1| 502|Drosophila melanogaster CG3631-PB... 29 8.6
AE014297-1908|AAF55106.1| 502|Drosophila melanogaster CG3631-PA... 29 8.6
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 29 8.6
>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
protein.
Length = 1489
Score = 33.9 bits (74), Expect = 0.30
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +2
Query: 50 QDNLVKSDYGLSKENFNYFLNALKNDLDTLAERIKEKSEKAGQEISTISQKTAPYFKKID 229
Q+N+V ++N A NDLD E +KE E +E+ +SQK A FK
Sbjct: 1064 QENIVDHQMEKLEKNCEQKETAHNNDLDLTDEDLKEFLEPMVEEVELMSQKKANDFKDFL 1123
Query: 230 EDFRREWSSFTRKSLMIRL 286
E E +++ I L
Sbjct: 1124 EPMPEELELMSQQKKNILL 1142
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 328 FAKIFDTIYKGTEPIVESII-NTYVETVKKIAELYXIQLEPQVRQLYETLAALLKEYLDG 504
F I D Y+ + + ++ N + V + + I LEP V++L T+ K+Y+
Sbjct: 1422 FKCIVDMTYQNLKCYINRLLSNKPMFEVNAVLLMSEIVLEPSVQELQNTIVTATKDYISR 1481
Query: 505 LT--TSWRT 525
L T W T
Sbjct: 1482 LRIFTRWMT 1490
>AY069624-1|AAL39769.1| 835|Drosophila melanogaster LD39455p
protein.
Length = 835
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 343 DTIYKGTEPIVESIINTYVETVKKIAELYXIQLEPQVRQLYETLAAL 483
D++ TEP+ S+ N + V+ +LY +++ + QL++ L L
Sbjct: 112 DSLAFATEPVFASLANVVGDNVRSEKKLYDVEIRHGLLQLFDGLQFL 158
>AE014297-4301|AAF56841.1| 835|Drosophila melanogaster CG1951-PA
protein.
Length = 835
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 343 DTIYKGTEPIVESIINTYVETVKKIAELYXIQLEPQVRQLYETLAAL 483
D++ TEP+ S+ N + V+ +LY +++ + QL++ L L
Sbjct: 112 DSLAFATEPVFASLANVVGDNVRSEKKLYDVEIRHGLLQLFDGLQFL 158
>BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p protein.
Length = 1104
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 190 DIPKNSSLLQENR*RLPQRMEQFYQEVTDDKTLKELSHAFN-EIVQFFAKIFDTIYKGTE 366
D P N S +E P + E +EV ++K + E+S + + + T +E
Sbjct: 725 DEPMNFSDDEEEPVPEPVKEETLVEEVVEEKPIVEVSVVDDSKTITTVTTTTTTTETISE 784
Query: 367 PIVESIINTYVETVKKIAELYXIQLEP---QVRQLYETLAALLKEYLD 501
P++ VE VKK E ++ +P + +L+ + A +L+ +D
Sbjct: 785 PVISEQPKKTVEPVKKPEESTEVEPKPLSSNIWELHSSYADVLRHTVD 832
>AY060387-1|AAL25426.1| 421|Drosophila melanogaster LD29155p
protein.
Length = 421
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 495 FRWLDDLVAHFAALITDFFEKHKPELQEFTNVITD 599
FRW +V L + + K PELQ+ N+ TD
Sbjct: 183 FRWTPIVVGRVVNLKKEIYAKGDPELQQTINIETD 217
>AE014297-1910|AAS65154.1| 421|Drosophila melanogaster CG3631-PC,
isoform C protein.
Length = 421
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 495 FRWLDDLVAHFAALITDFFEKHKPELQEFTNVITD 599
FRW +V L + + K PELQ+ N+ TD
Sbjct: 183 FRWTPIVVGRVVNLKKEIYAKGDPELQQTINIETD 217
>AE014297-1909|AAN13620.1| 502|Drosophila melanogaster CG3631-PB,
isoform B protein.
Length = 502
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 495 FRWLDDLVAHFAALITDFFEKHKPELQEFTNVITD 599
FRW +V L + + K PELQ+ N+ TD
Sbjct: 264 FRWTPIVVGRVVNLKKEIYAKGDPELQQTINIETD 298
>AE014297-1908|AAF55106.1| 502|Drosophila melanogaster CG3631-PA,
isoform A protein.
Length = 502
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 495 FRWLDDLVAHFAALITDFFEKHKPELQEFTNVITD 599
FRW +V L + + K PELQ+ N+ TD
Sbjct: 264 FRWTPIVVGRVVNLKKEIYAKGDPELQQTINIETD 298
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 190 DIPKNSSLLQENR*RLPQRMEQFYQEVTDDKTLKELSHAFN-EIVQFFAKIFDTIYKGTE 366
D P N S +E P + E +EV ++K + E+S + + + T +E
Sbjct: 4967 DEPMNFSDDEEEPVPEPVKEETLVEEVVEEKPIVEVSVVDDSKTITTVTTTTTTTETISE 5026
Query: 367 PIVESIINTYVETVKKIAELYXIQLEP---QVRQLYETLAALLKEYLD 501
P++ VE VKK E ++ +P + +L+ + A +L+ +D
Sbjct: 5027 PVISEQPKKTVEPVKKPEESTEVEPKPLSSNIWELHSSYADVLRHTVD 5074
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,653,596
Number of Sequences: 53049
Number of extensions: 694926
Number of successful extensions: 2731
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -